RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 KLF16Q9BXK1 252 aaPredicted RBP27.12■■□□□ 1.93
HLA-F-227ENST00000485513 CYLDQ9NQC7 956 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 RXFP3Q9NSD7 469 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 PCDHA5Q9Y5H7 936 aa27.12■■□□□ 1.93
HLA-F-227ENST00000485513 SGK1O00141 431 aa27.11■■□□□ 1.93
HLA-F-227ENST00000485513 ALDH1A2O94788 518 aa27.11■■□□□ 1.93
HLA-F-227ENST00000485513 ATP5C1P36542 298 aaKnown RBP27.11■■□□□ 1.93
HLA-F-227ENST00000485513 ANO4Q32M45 955 aa27.11■■□□□ 1.93
HLA-F-227ENST00000485513 PREPLQ4J6C6 727 aaPredicted RBP27.11■■□□□ 1.93
HLA-F-227ENST00000485513 IL31Q6EBC2 164 aa27.11■■□□□ 1.93
HLA-F-227ENST00000485513 HTR3DQ70Z44 454 aa27.11■■□□□ 1.93
HLA-F-227ENST00000485513 TMEM25Q86YD3 366 aa27.11■■□□□ 1.93
HLA-F-227ENST00000485513 EEF2KMTQ96G04 330 aa27.11■■□□□ 1.93
HLA-F-227ENST00000485513 OSER1Q9NX31 292 aa27.11■■□□□ 1.93
HLA-F-227ENST00000485513 DEC1Q9P2X7 70 aa27.11■■□□□ 1.93
HLA-F-227ENST00000485513 MYO18AQ92614 2054 aaKnown RBP27.11■■□□□ 1.93
HLA-F-227ENST00000485513 TBC1D3BA6NDS4 549 aa27.1■■□□□ 1.93
HLA-F-227ENST00000485513 TULP3O75386 442 aa27.1■■□□□ 1.93
HLA-F-227ENST00000485513 HNRNPLP14866 589 aaKnown RBP eCLIP27.1■■□□□ 1.93
HLA-F-227ENST00000485513 MCCD1P59942 119 aaPredicted RBP27.1■■□□□ 1.93
HLA-F-227ENST00000485513 CREB5Q02930 508 aa27.1■■□□□ 1.93
HLA-F-227ENST00000485513 GOLGA8FQ08AF8 430 aa27.1■■□□□ 1.93
HLA-F-227ENST00000485513 GOLGA8DPQ0D2H9 430 aa27.1■■□□□ 1.93
HLA-F-227ENST00000485513 PNOCQ13519 176 aa27.1■■□□□ 1.93
HLA-F-227ENST00000485513 EOGTQ5NDL2 527 aa27.1■■□□□ 1.93
HLA-F-227ENST00000485513 DDX1Q92499 740 aaKnown RBP27.1■■□□□ 1.93
HLA-F-227ENST00000485513 GTF3C3Q9Y5Q9 886 aa27.1■■□□□ 1.93
HLA-F-227ENST00000485513 THADAQ6YHU6 1953 aa27.09■■□□□ 1.93
HLA-F-227ENST00000485513 BCLAF3A2AJT9 711 aaKnown RBP27.09■■□□□ 1.93
HLA-F-227ENST00000485513 CETN3O15182 167 aa27.09■■□□□ 1.93
HLA-F-227ENST00000485513 GREM1O60565 184 aa27.09■■□□□ 1.93
HLA-F-227ENST00000485513 EPB41P11171 864 aaKnown RBP27.09■■□□□ 1.93
HLA-F-227ENST00000485513 MXI1P50539 228 aa27.09■■□□□ 1.93
HLA-F-227ENST00000485513 ZNF394Q53GI3 561 aa27.09■■□□□ 1.93
HLA-F-227ENST00000485513 PPP1R26Q5T8A7 1209 aaPredicted RBP27.09■■□□□ 1.93
HLA-F-227ENST00000485513 FBXL13Q8NEE6 735 aa27.09■■□□□ 1.93
HLA-F-227ENST00000485513 SEMA4DQ92854 862 aa27.09■■□□□ 1.93
HLA-F-227ENST00000485513 FAXDC2Q96IV6 333 aa27.09■■□□□ 1.93
HLA-F-227ENST00000485513 DUSP16Q9BY84 665 aa27.09■■□□□ 1.93
HLA-F-227ENST00000485513 NMUR1Q9HB89 426 aa27.09■■□□□ 1.93
HLA-F-227ENST00000485513 POLMQ9NP87 494 aaPredicted RBP27.09■■□□□ 1.93
HLA-F-227ENST00000485513 ZDHHC4Q9NPG8 344 aa27.09■■□□□ 1.93
HLA-F-227ENST00000485513 RMND1Q9NWS8 449 aa27.09■■□□□ 1.93
HLA-F-227ENST00000485513 LSM7Q9UK45 103 aaKnown RBP27.09■■□□□ 1.93
HLA-F-227ENST00000485513 CNOT1A5YKK6 2376 aaKnown RBP27.09■■□□□ 1.93
HLA-F-227ENST00000485513 NUP205Q92621 2012 aa27.08■■□□□ 1.93
HLA-F-227ENST00000485513 A0A1W2PQH9 124 aa27.08■■□□□ 1.93
HLA-F-227ENST00000485513 STX10O60499 249 aa27.08■■□□□ 1.93
HLA-F-227ENST00000485513 CAVIN2O95810 425 aa27.08■■□□□ 1.93
HLA-F-227ENST00000485513 RARGP13631 454 aa27.08■■□□□ 1.93
HLA-F-227ENST00000485513 KIF11P52732 1056 aa27.08■■□□□ 1.93
HLA-F-227ENST00000485513 STPG1Q5TH74 334 aa27.08■■□□□ 1.93
HLA-F-227ENST00000485513 PMS2CLQ68D20 193 aa27.08■■□□□ 1.93
HLA-F-227ENST00000485513 NUDT18Q6ZVK8 323 aa27.08■■□□□ 1.93
HLA-F-227ENST00000485513 FMR1NBQ8N0W7 255 aaPredicted RBP27.08■■□□□ 1.93
HLA-F-227ENST00000485513 TTC39CQ8N584 583 aa27.08■■□□□ 1.93
HLA-F-227ENST00000485513 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.08■■□□□ 1.93
HLA-F-227ENST00000485513 RAB20Q9NX57 234 aa27.08■■□□□ 1.93
HLA-F-227ENST00000485513 ADAM23O75077 832 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 ADRB1P08588 477 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 BCKDHBP21953 392 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 TCEAL6Q6IPX3 200 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 KLHDC10Q6PID8 442 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 TERB1Q8NA31 727 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 OLIG1Q8TAK6 271 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 KCNV2Q8TDN2 545 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 TCEAL3Q969E4 200 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 HEXIM2Q96MH2 286 aaKnown RBP27.07■■□□□ 1.92
HLA-F-227ENST00000485513 CISHQ9NSE2 258 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 DNMT3LQ9UJW3 386 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 NAGPAQ9UK23 515 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 NUDT5Q9UKK9 219 aa27.07■■□□□ 1.92
HLA-F-227ENST00000485513 MDM4O15151 490 aa27.06■■□□□ 1.92
HLA-F-227ENST00000485513 PRCPP42785 496 aa27.06■■□□□ 1.92
HLA-F-227ENST00000485513 C10orf120Q5SQS8 335 aa27.06■■□□□ 1.92
HLA-F-227ENST00000485513 C10orf76Q5T2E6 689 aa27.06■■□□□ 1.92
HLA-F-227ENST00000485513 CCDC186Q7Z3E2 898 aa27.06■■□□□ 1.92
HLA-F-227ENST00000485513 TRMT11Q7Z4G4 463 aaKnown RBP27.06■■□□□ 1.92
HLA-F-227ENST00000485513 ZNF513Q8N8E2 541 aaPredicted RBP27.06■■□□□ 1.92
HLA-F-227ENST00000485513 BBS2Q9BXC9 721 aa27.06■■□□□ 1.92
HLA-F-227ENST00000485513 DNAJC17Q9NVM6 304 aaKnown RBP27.06■■□□□ 1.92
HLA-F-227ENST00000485513 BCCIPQ9P287 314 aaKnown RBP eCLIP27.06■■□□□ 1.92
HLA-F-227ENST00000485513 LAMA1P25391 3075 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 TPRP12270 2363 aaKnown RBP27.05■■□□□ 1.92
HLA-F-227ENST00000485513 GOLGA6L4A6NEF3 574 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 NEDD8-MDP1E9PL57 170 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 KCNA4P22459 653 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 PLA2G4AP47712 749 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 PSEN1P49768 467 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 ZNF658Q5TYW1 1059 aaPredicted RBP27.05■■□□□ 1.92
HLA-F-227ENST00000485513 GRAMD4Q6IC98 578 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 SCD5Q86SK9 330 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 TADA2BQ86TJ2 420 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 HMGB4Q8WW32 186 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 TMEM176AQ96HP8 235 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 GSDMAQ96QA5 445 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 XPO6Q96QU8 1125 aaKnown RBP27.05■■□□□ 1.92
HLA-F-227ENST00000485513 TSG101Q99816 390 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 WDR35Q9P2L0 1181 aa27.05■■□□□ 1.92
HLA-F-227ENST00000485513 CIZ1Q9ULV3 898 aaPredicted RBP27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms