RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 TPH2Q8IWU9 490 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 CCDC33Q8N5R6 958 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 PDCD7Q8N8D1 485 aaKnown RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 CCDC110Q8TBZ0 833 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 GRIN3AQ8TCU5 1115 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 CPT1BQ92523 772 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 VCPIP1Q96JH7 1222 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 BTBD6Q96KE9 485 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 PWWP2AQ96N64 755 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 RPRD1AQ96P16 312 aaPredicted RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 RTKNQ9BST9 563 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 FTHL17Q9BXU8 183 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 CENPHQ9H3R5 247 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 ACP6Q9NPH0 428 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 IL20Q9NYY1 176 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 RSL24D1Q9UHA3 163 aaKnown RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 ERVK-11Q9UQG0 969 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 PLXNB3Q9ULL4 1909 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 TCRBV5S2A0A599 114 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 PLOD2O00469 737 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 MEIS2O14770 477 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 ADCY6O43306 1168 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 IDH3BO43837 385 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 SPAG6O75602 509 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 AXLP30530 894 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 MATR3P43243 847 aaKnown RBP eCLIP4.27□□□□□ -1.73
USP16-205ENST00000474835 MAGEA4P43358 317 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 ENTPD1P49961 510 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 GALK1P51570 392 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 NDST1P52848 882 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 ZRSR2Q15696 482 aaKnown RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 MGAT5BQ3V5L5 792 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 FNBP1LQ5T0N5 605 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 THOC7Q6I9Y2 204 aaKnown RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 SV2BQ7L1I2 683 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 FBXO11Q86XK2 927 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 ZNF354CQ86Y25 554 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 LURAP1LQ8IV03 231 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 CENPSQ8N2Z9 138 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 EXD1Q8NHP7 514 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 RMDN3Q96TC7 470 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 C11orf84Q9BUA3 381 aaPredicted RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 ZC3H12CQ9C0D7 883 aaKnown RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 LRRC27Q9C0I9 530 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 CLPBQ9H078 707 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 ADAMTS10Q9H324 1103 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 PSMC3IPQ9P2W1 217 aaPredicted RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 HEY2Q9UBP5 337 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 DNAJC16Q9Y2G8 782 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 TRAF6Q9Y4K3 522 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 ZFC3H1O60293 1989 aaKnown RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 NPHP3-ACAD11A0A0J9YXS1 232 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 ZBTB14O43829 449 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 STK10O94804 968 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 H6PDO95479 791 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 NTRK1P04629 796 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 ENPP1P22413 925 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 ZNF76P36508 570 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 LEPRP48357 1165 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 TMBIM6P55061 237 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 RHBDL3P58872 404 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 GPC5P78333 572 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PHC1P78364 1004 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 THOC5Q13769 683 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 DGKDQ16760 1214 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 TMEM266Q2M3C6 531 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 RNF207Q6ZRF8 634 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PLPP6Q8IY26 295 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 CPNE9Q8IYJ1 553 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 ST13P4Q8IZP2 240 aaPredicted RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 LGI2Q8N0V4 545 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PQLC1Q8N2U9 271 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 NEDD1Q8NHV4 660 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 FUBP1Q96AE4 644 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 MED30Q96HR3 178 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PLEKHA8Q96JA3 519 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 MFSD14AQ96MC6 490 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 YME1L1Q96TA2 773 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 ZKSCAN3Q9BRR0 538 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 YTHDF1Q9BYJ9 559 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 MUC3BQ9H195 1237 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 TRABDQ9H4I3 376 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 RMI1Q9H9A7 625 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 POPDC2Q9HBU9 364 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PFDN4Q9NQP4 134 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 CLIC5Q9NZA1 410 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 PIM2Q9P1W9 311 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 XPO7Q9UIA9 1087 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 G3BP2Q9UN86 482 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 RAD54BQ9Y620 910 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 TDRD15B5MCY1 1934 aaKnown RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 A0A0G2JMP0 313 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 KRBA1A5PL33 1030 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 GOLGA8TH3BQL2 631 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 NDC80O14777 642 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 ZNF189O75820 626 aaPredicted RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 LYPLA2O95372 231 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 UBTFL6P0CB48 400 aaPredicted RBP4.26□□□□□ -1.73
USP16-205ENST00000474835 GOLGA8HP0CJ92 632 aa4.26□□□□□ -1.73
USP16-205ENST00000474835 DNAJB1P25685 340 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms