RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 VPS11Q9H270 941 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 STN1Q9H668 368 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 LIN7BQ9HAP6 207 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 USP29Q9HBJ7 922 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF287Q9HBT7 754 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ARNT2Q9HBZ2 717 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 LRRC4CQ9HCJ2 640 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 TMEM260Q9NX78 707 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 MAP3K20Q9NYL2 800 aaKnown RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 CLIC5Q9NZA1 410 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 SELENONQ9NZV5 590 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 ARMCX3Q9UH62 379 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-207ENST00000468925 SLC12A7Q9Y666 1083 aa5.06□□□□□ -1.6
SF3B1-207ENST00000468925 C3P01024 1663 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 RTL9Q8NET4 1388 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 TMEM131LA2VDJ0 1609 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 ALKQ9UM73 1620 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 PCDH11YQ9BZA8 1340 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 PI4KAP2A4QPH2 592 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 CFAP69A5D8W1 941 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 FAM172BPA6NC97 362 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 LRRC53A6NM62 1247 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 DCDC2CA8MYV0 355 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 KIAA0391O15091 583 aaKnown RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 KCNQ3O43525 872 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 NCK2O43639 380 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 BUB1O43683 1085 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 TSPAN1O60635 241 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 EXOC3O60645 756 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 NOL3O60936 208 aaKnown RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 KRT36O76013 467 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 CAMTA2O94983 1202 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 FKBP9O95302 570 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 TTC4O95801 387 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 FGAP02671 866 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 A1BGP04217 495 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 NFICP08651 508 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 FAM58BPP0C7Q3 252 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 PCP11498 1178 aaKnown RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 ADH5P11766 374 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 PABPC1P11940 636 aaKnown RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 CDH2P19022 906 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 CALML3P27482 149 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 ETV3P41162 512 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 CETN2P41208 172 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 PRKCIP41743 596 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 EIF2B2P49770 351 aaKnown RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF157P51786 506 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 NAA20P61599 178 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 CTAG1AP78358 180 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 IFI35P80217 286 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 MECOMQ03112 1051 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 ZBTB16Q05516 673 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 SOX4Q06945 474 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 KLHL30Q0D2K2 578 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 ORC1Q13415 861 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 KRR1Q13601 381 aaKnown RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 THOC5Q13769 683 aaKnown RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 EPHA7Q15375 998 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 TGFBIQ15582 683 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 SLC15A2Q16348 729 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 ASIC2Q16515 512 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 CYP1B1Q16678 543 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF568Q3ZCX4 644 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 ANKDD1AQ495B1 522 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 TAF1BQ53T94 588 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 MIIPQ5JXC2 388 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 WDR45BQ5MNZ6 344 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 EXOSC6Q5RKV6 272 aaKnown RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 RARS2Q5T160 578 aaKnown RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 TMEM132EQ6IEE7 984 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 CENPPQ6IPU0 288 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 UGT2A3Q6UWM9 527 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 VSTM1Q6UX27 236 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 TPTE2Q6XPS3 522 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 DCDC5Q6ZRR9 648 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 ERMP1Q7Z2K6 904 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 SATL1Q86VE3 508 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 HEATR4Q86WZ0 1026 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 GRAMD2AQ8IUY3 354 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 TPH2Q8IWU9 490 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 CCDC105Q8IYK2 499 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 SPARTQ8N0X7 666 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 METTL13Q8N6R0 699 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 PI4KAP1Q8N8J0 262 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 LRRC57Q8N9N7 239 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 PCYOX1LQ8NBM8 494 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 SLC17A8Q8NDX2 589 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 ADCY4Q8NFM4 1077 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 RAB3IL1Q8TBN0 382 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 SUN5Q8TC36 379 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 NRG4Q8WWG1 115 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 PRPF31Q8WWY3 499 aaKnown RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 PTCD3Q96EY7 689 aaKnown RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 CFAP36Q96G28 342 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 GPR101Q96P66 508 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-207ENST00000468925 RMDN3Q96TC7 470 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 C7orf25Q9BPX7 421 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 HEPHQ9BQS7 1158 aa5.05□□□□□ -1.6
SF3B1-207ENST00000468925 C1orf50Q9BV19 199 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms