RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 CCDC33Q8N5R6 958 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 NIPA2Q8N8Q9 360 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 PPP4R1Q8TF05 950 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 FAM172AQ8WUF8 416 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 UCMAQ8WVF2 138 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 E2F7Q96AV8 911 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 SLITRK1Q96PX8 696 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 CRAMP1Q96RY5 1269 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 POP1Q99575 1024 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 MAK16Q9BXY0 300 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 MRPS26Q9BYN8 205 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 IMPG2Q9BZV3 1241 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 NRDE2Q9H7Z3 1164 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 MRPL40Q9NQ50 206 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 CYP26B1Q9NR63 512 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 TBC1D22BQ9NU19 505 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 DNAJC17Q9NVM6 304 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 TBCCD1Q9NVR7 557 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 MAP3K20Q9NYL2 800 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 AGTPBP1Q9UPW5 1226 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 JAG2Q9Y219 1238 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 TBC1D30Q9Y2I9 924 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 DYTNA2CJ06 578 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 CAPN14A8MX76 684 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 H3BNX3 289 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 H3BRJ5 948 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 KHNYNO15037 678 aaKnown RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 MCF2LO15068 1137 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 SLC22A2O15244 555 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 CHMP2AO43633 222 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 GRIN3BO60391 1043 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 CCNT2O60583 730 aaKnown RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 DKK1O94907 266 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 TNFAIP8O95379 198 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 LDHAP00338 332 aaKnown RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 ASLP04424 464 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 WEE2P0C1S8 567 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 FAM200BP0CF97 657 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 VAV1P15498 845 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 ATF7P17544 494 aaPredicted RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 GRK2P25098 689 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 ACADVLP49748 655 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 HK2P52789 917 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 COPAP53621 1224 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 RTP1P59025 263 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 FKBP1AP62942 108 aaKnown RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 TMPRSS15P98073 1019 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 CYP24A1Q07973 514 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 ADCY1Q08828 1119 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 CDC16Q13042 620 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 PTK7Q13308 1070 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 MAMLD1Q13495 774 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 NAB1Q13506 487 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 DCTN2Q13561 401 aaKnown RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 SPIDRQ14159 915 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 TFDP2Q14188 446 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 OASLQ15646 514 aaKnown RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 BRDTQ58F21 947 aaPredicted RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 FAM182BQ5T319 152 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 UBAP2Q5T6F2 1119 aaKnown RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 ANGEL2Q5VTE6 544 aaKnown RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 SLFN12LQ6IEE8 588 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 DNAJC24Q6P3W2 148 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 RFWD3Q6PCD5 774 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 DCUN1D2Q6PH85 259 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 RINLQ6ZS11 566 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 SEPT14Q6ZU15 432 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 PRPF39Q86UA1 669 aaKnown RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 MAP4K3Q8IVH8 894 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 RTKN2Q8IZC4 609 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 GPD1LQ8N335 351 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 TMEM35BQ8NCS4 154 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 MCPH1Q8NEM0 835 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 RFWD2Q8NHY2 731 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 PPP1R14CQ8TAE6 165 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 SLC35B2Q8TB61 432 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 DTX3LQ8TDB6 740 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 ACMSDQ8TDX5 336 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 NRG4Q8WWG1 115 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 SLC44A1Q8WWI5 657 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 TTC17Q96AE7 1141 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 BTBD6Q96KE9 485 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 FBXL18Q96ME1 805 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 RILPQ96NA2 401 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 THTPAQ9BU02 230 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 HEMGNQ9BXL5 484 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 KRT82Q9NSB4 513 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 HOMER2Q9NSB8 354 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 PCMTD2Q9NV79 361 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 THAP1Q9NVV9 213 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 RAB26Q9ULW5 256 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 PRPF19Q9UMS4 504 aaKnown RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 DMTF1Q9Y222 760 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 R3HDM2Q9Y2K5 976 aaKnown RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 MAD1L1Q9Y6D9 718 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 SQORQ9Y6N5 450 aa7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 COL2A1P02458 1487 aaPredicted RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 ZNF335Q9H4Z2 1342 aaPredicted RBP7.47□□□□□ -1.21
CLSTN1-204ENST00000464286 ZNFX1Q9P2E3 1918 aaKnown RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms