RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 IFI16Q16666 785 aaKnown RBP15.02■□□□□ -0
COL6A1-202ENST00000463060 CCDC14Q49A88 953 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 SYPL2Q5VXT5 272 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 C11orf63Q6NUN7 778 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 GPR153Q6NV75 609 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 DCUN1D2Q6PH85 259 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 ITIH5Q86UX2 942 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 DEFB106AQ8N104 65 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 ARFGAP1Q8N6T3 406 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 CMASQ8NFW8 434 aaPredicted RBP15.02■□□□□ -0
COL6A1-202ENST00000463060 FBXO32Q969P5 355 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 PPP2R3CQ969Q6 453 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 ZNF512Q96ME7 567 aaPredicted RBP15.02■□□□□ -0
COL6A1-202ENST00000463060 NPY6RQ99463 290 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 CNPY3Q9BT09 278 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 PRKD2Q9BZL6 878 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 ABCC13Q9NSE7 274 aa15.02■□□□□ -0
COL6A1-202ENST00000463060 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.02■□□□□ -0
COL6A1-202ENST00000463060 NOTCH4Q99466 2003 aa15.02□□□□□ -0.01
COL6A1-202ENST00000463060 PRRC2BQ5JSZ5 2229 aaKnown RBP15.01□□□□□ -0.01
COL6A1-202ENST00000463060 CDH23Q9H251 3354 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 ZNF840PA6NDX5 716 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 NRG2O14511 850 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-202ENST00000463060 ZNF500O60304 480 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-202ENST00000463060 TFE3P19532 575 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-202ENST00000463060 PPP3CCP48454 512 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 IFRD2Q12894 506 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-202ENST00000463060 PIGHQ14442 188 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-202ENST00000463060 ACAP1Q15027 740 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 CTC1Q2NKJ3 1217 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 SLC25A52Q3SY17 297 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 OTUD1Q5VV17 481 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-202ENST00000463060 GAREM2Q75VX8 874 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 CPNE8Q86YQ8 564 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 HS6ST3Q8IZP7 471 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 ARHGAP18Q8N392 663 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 PDZD8Q8NEN9 1154 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 FAM149B1Q96BN6 582 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 SLITRK1Q96PX8 696 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 TLR8Q9NR97 1041 aaKnown RBP15.01□□□□□ -0.01
COL6A1-202ENST00000463060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL6A1-202ENST00000463060 CALCOCO1Q9P1Z2 691 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 IP6K2Q9UHH9 426 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 LCMT1Q9UIC8 334 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 MAGED2Q9UNF1 606 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-202ENST00000463060 NAALADL1Q9UQQ1 740 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 ALG6Q9Y672 507 aa15.01□□□□□ -0.01
COL6A1-202ENST00000463060 REV3LO60673 3130 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 CCDC195A0A1B0GUA6 201 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 FANCGO15287 622 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 CCL16O15467 120 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 LINC01565O15544 149 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 PALMO75781 387 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 IGLV3-25P01717 112 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 PTPN2P17706 415 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 GPD1P21695 349 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 MAN1A1P33908 653 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 PITX1P78337 314 aaPredicted RBP15□□□□□ -0.01
COL6A1-202ENST00000463060 MESDQ14696 234 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 RAB6CQ53S08 254 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 DCAF6Q58WW2 860 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 SH3PXD2AQ5TCZ1 1133 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 ZNF697Q5TEC3 545 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 MSANTD2Q6P1R3 559 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 TRIM58Q8NG06 486 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 EDEM1Q92611 657 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 CASP10Q92851 521 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 CD101Q93033 1021 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 PGAP3Q96FM1 320 aaPredicted RBP15□□□□□ -0.01
COL6A1-202ENST00000463060 CFAP57Q96MR6 1250 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 TRIM62Q9BVG3 475 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 RAB6CQ9H0N0 254 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 GOLPH3Q9H4A6 298 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 IGFLR1Q9H665 355 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 DZANK1Q9NVP4 752 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 RRN3Q9NYV6 651 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 DNMT3BQ9UBC3 853 aaKnown RBP15□□□□□ -0.01
COL6A1-202ENST00000463060 UXTQ9UBK9 157 aaPredicted RBP15□□□□□ -0.01
COL6A1-202ENST00000463060 DOCK6Q96HP0 2047 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 ANAPC1Q9H1A4 1944 aa15□□□□□ -0.01
COL6A1-202ENST00000463060 MYO16Q9Y6X6 1858 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 KIF5CO60282 957 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 MOSPD3O75425 235 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 NCAM1P13591 858 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 RARGP13631 454 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 MSNP26038 577 aaKnown RBP14.99□□□□□ -0.01
COL6A1-202ENST00000463060 CCR2P41597 374 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 SLC1A1P43005 524 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 ETF1P62495 437 aaKnown RBP14.99□□□□□ -0.01
COL6A1-202ENST00000463060 C15orf59Q2T9L4 293 aaPredicted RBP14.99□□□□□ -0.01
COL6A1-202ENST00000463060 PABPC1LQ4VXU2 614 aaKnown RBP14.99□□□□□ -0.01
COL6A1-202ENST00000463060 ZNF569Q5MCW4 686 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 BTBD8Q5XKL5 378 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 SYCE2Q6PIF2 218 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 ELMSAN1Q6PJG2 1045 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 STRADAQ7RTN6 431 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 DAAM2Q86T65 1068 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 NT5DC3Q86UY8 548 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 SLC35F6Q8N357 371 aa14.99□□□□□ -0.01
COL6A1-202ENST00000463060 C12orf76Q8N812 135 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms