RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 VSTM1Q6UX27 236 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 TTC8Q8TAM2 541 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 GSDMBQ8TAX9 411 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 PIWIL1Q96J94 861 aaKnown RBP11.59□□□□□ -0.55
DDR1-240ENST00000454612 L3MBTL3Q96JM7 780 aaPredicted RBP11.59□□□□□ -0.55
DDR1-240ENST00000454612 NENFQ9UMX5 172 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 SOWAHBA6NEL2 793 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 DFFAO00273 331 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 UGT1A9O60656 530 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 LRCH4O75427 683 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 FARP2O94887 1054 aaPredicted RBP11.59□□□□□ -0.55
DDR1-240ENST00000454612 PYGLP06737 847 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 ACO1P21399 889 aaKnown RBP11.59□□□□□ -0.55
DDR1-240ENST00000454612 BEX3Q00994 111 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 KLC1Q07866 573 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 SURF1Q15526 300 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 PCSK7Q16549 785 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 OLFML2BQ68BL8 750 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 MTMR14Q8NCE2 650 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 CLEC4CQ8WTT0 213 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 CCT6BQ92526 530 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 LGMNQ99538 433 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 ACO2Q99798 780 aaKnown RBP11.59□□□□□ -0.55
DDR1-240ENST00000454612 UGT1A7Q9HAW7 530 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 UGT1A10Q9HAW8 530 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 UGT1A8Q9HAW9 530 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 TMPRSS4Q9NRS4 437 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 ASS1P00966 412 aaKnown RBP11.59□□□□□ -0.55
DDR1-240ENST00000454612 CYP2C9P11712 490 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 GRIA1P42261 906 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 WDR4P57081 412 aaKnown RBP11.59□□□□□ -0.55
DDR1-240ENST00000454612 THOC5Q13769 683 aaKnown RBP11.59□□□□□ -0.55
DDR1-240ENST00000454612 GRAMD1BQ3KR37 738 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 MSS51Q4VC12 460 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 HABP4Q5JVS0 413 aaKnown RBP11.59□□□□□ -0.55
DDR1-240ENST00000454612 FKBP1CQ5VVH2 108 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 SLC26A7Q8TE54 656 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 CKAP2Q8WWK9 683 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 CDKL2Q92772 493 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 TLCD1Q96CP7 247 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 FAM210AQ96ND0 272 aa11.59□□□□□ -0.55
DDR1-240ENST00000454612 hCG_1818297A0A087WSY0 165 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 M0QYT0 321 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 TRPA1O75762 1119 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 UBTFL6P0CB48 400 aaPredicted RBP11.58□□□□□ -0.56
DDR1-240ENST00000454612 MSX2P35548 267 aaPredicted RBP11.58□□□□□ -0.56
DDR1-240ENST00000454612 PGGT1BP53609 377 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 POU5F1Q01860 360 aaKnown RBP11.58□□□□□ -0.56
DDR1-240ENST00000454612 OLIG2Q13516 323 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 SLC12A1Q13621 1099 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 C6orf89Q6UWU4 347 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 ECHDC2Q86YB7 292 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 WDR49Q8IV35 697 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 PYROXD2Q8N2H3 581 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 REPS2Q8NFH8 660 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 RFWD2Q8NHY2 731 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 DNAJB3Q8WWF6 145 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 DDX1Q92499 740 aaKnown RBP11.58□□□□□ -0.56
DDR1-240ENST00000454612 MAGEB18Q96M61 343 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 AAASQ9NRG9 546 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 FER1L6Q2WGJ9 1857 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 HBP1O60381 514 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 KRT38O76015 456 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 C6orf222P0C671 652 aaPredicted RBP11.58□□□□□ -0.56
DDR1-240ENST00000454612 ZCCHC18P0CG32 403 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 GNL1P36915 607 aaPredicted RBP11.58□□□□□ -0.56
DDR1-240ENST00000454612 RFC5P40937 340 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 SLC12A2P55011 1212 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 DPYSL3Q14195 570 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 FAM183BPQ6ZVS7 135 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 NIPA1Q7RTP0 329 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 TTC7BQ86TV6 843 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 GBP7Q8N8V2 638 aaPredicted RBP11.58□□□□□ -0.56
DDR1-240ENST00000454612 CHST13Q8NET6 341 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 ZNF483Q8TF39 744 aaPredicted RBP11.58□□□□□ -0.56
DDR1-240ENST00000454612 SIPA1L1O43166 1804 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 GON4LQ3T8J9 2241 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 PPEF2O14830 753 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 HSPA4LO95757 839 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 TAC1P20366 129 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 AQP5P55064 265 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 NCALDP61601 193 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 PPP1R26Q5T8A7 1209 aaPredicted RBP11.58□□□□□ -0.56
DDR1-240ENST00000454612 CRELD2Q6UXH1 353 aaPredicted RBP11.58□□□□□ -0.56
DDR1-240ENST00000454612 RGS9BPQ6ZS82 235 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 KATNAL2Q8IYT4 538 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 SPATA6LQ8N4H0 392 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 C1orf127Q8N9H9 656 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 ATXN2LQ8WWM7 1075 aaKnown RBP11.58□□□□□ -0.56
DDR1-240ENST00000454612 TXNRD2Q9NNW7 524 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 CPA4Q9UI42 421 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 PAIP2BQ9ULR5 123 aaKnown RBP11.58□□□□□ -0.56
DDR1-240ENST00000454612 C15orf41Q9Y2V0 281 aa11.58□□□□□ -0.56
DDR1-240ENST00000454612 WDR27A2RRH5 827 aa11.57□□□□□ -0.56
DDR1-240ENST00000454612 SCAMP3O14828 347 aaKnown RBP11.57□□□□□ -0.56
DDR1-240ENST00000454612 SPTLC1O15269 473 aa11.57□□□□□ -0.56
DDR1-240ENST00000454612 TSPAN3O60637 253 aa11.57□□□□□ -0.56
DDR1-240ENST00000454612 NPM3O75607 178 aaKnown RBP11.57□□□□□ -0.56
DDR1-240ENST00000454612 ARF4P18085 180 aaPredicted RBP11.57□□□□□ -0.56
DDR1-240ENST00000454612 GBE1Q04446 702 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms