RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 PTK6Q13882 451 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 FAM47CQ5HY64 1035 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SAMD4BQ5PRF9 694 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 FAM83BQ5T0W9 1011 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 FAM45BPQ6NSW5 357 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SLC2A7Q6PXP3 512 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SHC4Q6S5L8 630 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 RNF19BQ6ZMZ0 732 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 C3orf62Q6ZUJ4 267 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PLEKHM3Q6ZWE6 761 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TMC7Q7Z402 723 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TTC7BQ86TV6 843 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SATL1Q86VE3 508 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PPIL6Q8IXY8 311 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CLEC4FQ8N1N0 589 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PQLC1Q8N2U9 271 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MARVELD2Q8N4S9 558 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ATPAF2Q8N5M1 289 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 POC5Q8NA72 575 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TBC1D16Q8TBP0 767 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MDM1Q8TC05 714 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 EPS8L3Q8TE67 593 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 SLC9A6Q92581 669 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DPF3Q92784 378 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 NCLNQ969V3 563 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 RHBDF1Q96CC6 855 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MRRFQ96E11 262 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 HAPLN3Q96S86 360 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TCF12Q99081 682 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PPA2Q9H2U2 334 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TMEM206Q9H813 350 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 C12orf10Q9HB07 376 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CYP4F11Q9HBI6 524 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 KBTBD4Q9NVX7 518 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ERAP1Q9NZ08 941 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 LRP5O75197 1615 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ABCC6O95255 1503 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 NCANO14594 1321 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MAGEB6P1A0A0J9YX57 407 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 G3V3G9 751 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TRAFD1O14545 582 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 RGS5O15539 181 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MED7O43513 233 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 NUAK1O60285 661 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TCEA3O75764 348 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 FBXO21O94952 628 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MAP3K6O95382 1288 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 OXSR1O95747 527 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 PTTG1O95997 202 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MYL2P10916 166 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ZNF23P17027 643 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TATP17735 454 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 OSBPP22059 807 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 FGFR3P22607 806 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PSMA2P25787 234 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SOX5P35711 763 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SARSP49591 514 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 NLRP6P59044 892 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PRAMEP78395 509 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PTK2Q05397 1052 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PDIA2Q13087 525 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 PTK7Q13308 1070 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TFDP2Q14188 446 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 COG2Q14746 738 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DCAF8Q5TAQ9 597 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DDI2Q5TDH0 399 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PAOXQ6QHF9 649 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ZYG11AQ6WRX3 759 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 CYB5R4Q7L1T6 521 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 EIF3MQ7L2H7 374 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 C16orf62Q7Z3J2 963 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 GALNT7Q86SF2 657 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DCP2Q8IU60 420 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 CDAN1Q8IWY9 1227 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TIGD4Q8IY51 512 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 SPAG16Q8N0X2 631 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 OR8H2Q8N162 312 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 FBXW8Q8N3Y1 598 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ANKRD13CQ8N6S4 541 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 RDH13Q8NBN7 331 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ATAD1Q8NBU5 361 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 HIPK4Q8NE63 616 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 OR2W6PQ8NHA6 318 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TGFBRAP1Q8WUH2 860 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 NCSTNQ92542 709 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 MS4A14Q96JA4 679 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PRAM1Q96QH2 718 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 PURBQ96QR8 312 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 C7orf25Q9BPX7 421 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TRIM51Q9BSJ1 452 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 REXO4Q9GZR2 422 aaKnown RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 RACGAP1Q9H0H5 632 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 TPK1Q9H3S4 243 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 RNPEPQ9H4A4 650 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 C8orf33Q9H7E9 229 aaPredicted RBP2.27□□□□□ -2.05
USP53-202ENST00000450251 THAP1Q9NVV9 213 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 DNAJC28Q9NX36 388 aa2.27□□□□□ -2.05
USP53-202ENST00000450251 ZNF224Q9NZL3 707 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms