RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 PGK2P07205 417 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 STIP1P31948 543 aaKnown RBP11.76□□□□□ -0.53
SYVN1-204ENST00000449943 BCAR1P56945 870 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 ZCCHC23Q6ZST2 131 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 FAM183BPQ6ZVS7 135 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 NLRP7Q8WX94 980 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 BEGAINQ9BUH8 593 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 TTLL3Q9Y4R7 772 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 DPPA5A6NC42 116 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 SOWAHBA6NEL2 793 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 B2RBV5 119 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 TUBP50607 506 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 ALDH18A1P54886 795 aaKnown RBP11.76□□□□□ -0.53
SYVN1-204ENST00000449943 BST1Q10588 318 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 TFDP2Q14188 446 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 TRNP1Q6NT89 227 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 C12orf29Q8N999 325 aa11.76□□□□□ -0.53
SYVN1-204ENST00000449943 CORO1CQ9ULV4 474 aaPredicted RBP11.76□□□□□ -0.53
SYVN1-204ENST00000449943 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.76□□□□□ -0.53
SYVN1-204ENST00000449943 KAT6AQ92794 2004 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.75□□□□□ -0.53
SYVN1-204ENST00000449943 ARIH2O95376 493 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 SNRPAP09012 282 aaKnown RBP11.75□□□□□ -0.53
SYVN1-204ENST00000449943 TAF12Q16514 161 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 TAZQ16635 292 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 TMEM154Q6P9G4 183 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 TEX9Q8N6V9 391 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 CPB2Q96IY4 423 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 PPP1R12CQ9BZL4 782 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 TLE6Q9H808 572 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 DHRS4L1P0CG22 281 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 YY1P25490 414 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 VHLP40337 213 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 ZNF143P52747 638 aaPredicted RBP11.75□□□□□ -0.53
SYVN1-204ENST00000449943 ARHGEF6Q15052 776 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 CDCA2Q69YH5 1023 aaPredicted RBP11.75□□□□□ -0.53
SYVN1-204ENST00000449943 METTL7BQ6UX53 244 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 DLK2Q6UY11 383 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 CHSY1Q86X52 802 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 NUDCD3Q8IVD9 361 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 FBXO27Q8NI29 283 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 PPP1R14CQ8TAE6 165 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 RNF34Q969K3 372 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 C12orf42Q96LP6 360 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 PHACTR1Q9C0D0 580 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 C2orf40Q9H1Z8 148 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 R3HDMLQ9H3Y0 253 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 BTBD7Q9P203 1132 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 PAK5Q9P286 719 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 GPR25O00155 361 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 ACKR2O00590 384 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 APOL1O14791 398 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 B4GALT4O60513 344 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 LINGO3P0C6S8 592 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 STAG3L1P0CL83 205 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 SLC18A2Q05940 514 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 MAP1SQ66K74 1059 aaPredicted RBP11.75□□□□□ -0.53
SYVN1-204ENST00000449943 EFCAB12Q6NXP0 572 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 CHST13Q8NET6 341 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 UCMAQ8WVF2 138 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 SCG3Q8WXD2 468 aaKnown RBP11.75□□□□□ -0.53
SYVN1-204ENST00000449943 COPS5Q92905 334 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 E2F7Q96AV8 911 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 CLPTM1LQ96KA5 538 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 CNPY3Q9BT09 278 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 TUBB6Q9BUF5 446 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 KLC2Q9H0B6 622 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 PIH1D1Q9NWS0 290 aaKnown RBP11.75□□□□□ -0.53
SYVN1-204ENST00000449943 NR2E3Q9Y5X4 410 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 PHIPQ8WWQ0 1821 aa11.75□□□□□ -0.53
SYVN1-204ENST00000449943 SMAPO00193 183 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 CILPO75339 1184 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 PSMG1O95456 288 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 GPD2P43304 727 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 NDST1P52848 882 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 AQP5P55064 265 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 CA9Q16790 459 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 TSHZ1Q6ZSZ6 1077 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 PLD5Q8N7P1 536 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 NRG4Q8WWG1 115 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 MCRS1Q96EZ8 462 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 RNF157Q96PX1 679 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 SMYD2Q9NRG4 433 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 TSPAN16Q9UKR8 245 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 WASF2Q9Y6W5 498 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 CHADO15335 359 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 STK10O94804 968 aaKnown RBP11.74□□□□□ -0.53
SYVN1-204ENST00000449943 CSH1P0DML2 217 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 CSH2P0DML3 217 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 AMPD1P23109 780 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 TRMT10BQ6PF06 316 aaKnown RBP11.74□□□□□ -0.53
SYVN1-204ENST00000449943 ANKRD13AQ8IZ07 590 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 NDUFAF2Q8N183 169 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 SMC1BQ8NDV3 1235 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 HPDLQ96IR7 371 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 BCO2Q9BYV7 579 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 FAM49BQ9NUQ9 324 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 ETNK2Q9NVF9 386 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 TXNDC16Q9P2K2 825 aa11.74□□□□□ -0.53
SYVN1-204ENST00000449943 SPDYE5A6NIY4 337 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms