RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 MED10Q9BTT4 135 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 ADAM33Q9BZ11 813 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 DNAI2Q9GZS0 605 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 GPATCH2LQ9NWQ4 482 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 FARP1Q9Y4F1 1045 aaPredicted RBP16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 ABHD2P08910 425 aa16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 ATP5DP30049 168 aa16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 TFDP2Q14188 446 aa16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 STAT4Q14765 748 aa16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 PDK2Q15119 407 aa16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 SLC26A9Q7LBE3 791 aa16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 FAM71DQ8N9W8 422 aa16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 TEKT4Q8WW24 435 aa16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 P3H4Q92791 437 aa16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 RNF157Q96PX1 679 aa16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 XPO6Q96QU8 1125 aaKnown RBP16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 TBCBQ99426 244 aa16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 DUSP16Q9BY84 665 aa16.77■□□□□ 0.28
AP000253.1-201ENST00000449339 MYBPHLA2RUH7 354 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 B3GAT3O94766 335 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 RPL22P35268 128 aaKnown RBP16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 RPL34P49207 117 aaKnown RBP16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 ATXN1P54253 815 aaKnown RBP16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 HDAC4P56524 1084 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 FASTKD3Q14CZ7 662 aaKnown RBP16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 ZC3H12AQ5D1E8 599 aaKnown RBP16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 CD300LGQ6UXG3 332 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 NPNTQ6UXI9 565 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 CENPUQ71F23 418 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 B4GALNT4Q76KP1 1039 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 ZNF598Q86UK7 904 aaKnown RBP16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 PPIL6Q8IXY8 311 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 SLC43A3Q8NBI5 491 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 LINC01599Q8WXQ3 324 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 CPT1BQ92523 772 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 TTC25Q96NG3 672 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 SYT15Q9BQS2 421 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 TRIM17Q9Y577 477 aa16.77■□□□□ 0.27
AP000253.1-201ENST00000449339 GOLGA8MH3BSY2 632 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 XPO1O14980 1071 aaKnown RBP16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 CDH16O75309 829 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 ITGB1P05556 798 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 IL4RP24394 825 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 RPL9P32969 192 aaKnown RBP16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 ADIGQ0VDE8 80 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 NOMO1Q15155 1222 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 HP1BP3Q5SSJ5 553 aaPredicted RBP16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 ZC3H18Q86VM9 953 aaKnown RBP16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 ZBED8Q8IZ13 594 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 PGBD4Q96DM1 585 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 NCAPGQ9BPX3 1015 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 SNRNP25Q9BV90 132 aaKnown RBP16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 CYLDQ9NQC7 956 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 A0A087WUV0 522 aaPredicted RBP16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 MDM4O15151 490 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 ALOX15BO15296 676 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 B4GALT3O60512 393 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 NPR3P17342 541 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 YY1P25490 414 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 RDXP35241 583 aaKnown RBP16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 PTPN9P43378 593 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 NDUFV1P49821 464 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 MAP3K7CLP57077 242 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 ROR1Q01973 937 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 HIF1AQ16665 826 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 CLEC20AQ6ZU45 233 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 NAT8LQ8N9F0 302 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 ATXN2LQ8WWM7 1075 aaKnown RBP16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 HSFY1Q96LI6 401 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 RHOBTB2Q9BYZ6 727 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 PCDH18Q9HCL0 1135 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 KRT82Q9NSB4 513 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 INTS9Q9NV88 658 aaKnown RBP16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 TBK1Q9UHD2 729 aa16.76■□□□□ 0.27
AP000253.1-201ENST00000449339 TSC2P49815 1807 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 ARVCFO00192 962 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 STIP1P31948 543 aaKnown RBP16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 SCNN1AP37088 669 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 ACADSBP45954 432 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 CACNA2D1P54289 1103 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 GRIK3Q13003 919 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 PDIA2Q13087 525 aaKnown RBP16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 CA9Q16790 459 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 ANKRD20A8PQ5CZ79 823 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 ANKRD22Q5VYY1 191 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 DARS2Q6PI48 645 aaKnown RBP16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 ARCQ7LC44 396 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 ZNF784Q8NCA9 323 aaPredicted RBP16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 RTP3Q9BQQ7 232 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 C11orf84Q9BUA3 381 aaPredicted RBP16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 UNC93B1Q9H1C4 597 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 TMEM30AQ9NV96 361 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 LGALS13Q9UHV8 139 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 NAALADL1Q9UQQ1 740 aa16.75■□□□□ 0.27
AP000253.1-201ENST00000449339 LHX1P48742 406 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 ADCY1Q08828 1119 aa16.74■□□□□ 0.27
AP000253.1-201ENST00000449339 C1orf228Q6PIY5 440 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms