RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 KIF20AO95235 890 aa29.87■■■□□ 2.37
CBX4-202ENST00000448310 CD58P19256 250 aa29.87■■■□□ 2.37
CBX4-202ENST00000448310 INCA1Q0VD86 236 aa29.87■■■□□ 2.37
CBX4-202ENST00000448310 HSF5Q4G112 596 aaPredicted RBP29.87■■■□□ 2.37
CBX4-202ENST00000448310 N4BP2L1Q5TBK1 243 aaPredicted RBP29.87■■■□□ 2.37
CBX4-202ENST00000448310 FAM186BQ8IYM0 893 aa29.87■■■□□ 2.37
CBX4-202ENST00000448310 FRMD1Q8N878 549 aa29.87■■■□□ 2.37
CBX4-202ENST00000448310 HMGB4Q8WW32 186 aa29.87■■■□□ 2.37
CBX4-202ENST00000448310 HNRNPABQ99729 332 aaKnown RBP29.87■■■□□ 2.37
CBX4-202ENST00000448310 KLF16Q9BXK1 252 aaPredicted RBP29.87■■■□□ 2.37
CBX4-202ENST00000448310 IMPG2Q9BZV3 1241 aa29.87■■■□□ 2.37
CBX4-202ENST00000448310 POLMQ9NP87 494 aaPredicted RBP29.87■■■□□ 2.37
CBX4-202ENST00000448310 BCCIPQ9P287 314 aaKnown RBP eCLIP29.87■■■□□ 2.37
CBX4-202ENST00000448310 GON4LQ3T8J9 2241 aa29.87■■■□□ 2.37
CBX4-202ENST00000448310 TNRC6BQ9UPQ9 1833 aaKnown RBP29.87■■■□□ 2.37
CBX4-202ENST00000448310 PLXND1Q9Y4D7 1925 aa29.86■■■□□ 2.37
CBX4-202ENST00000448310 DHPSP49366 369 aaPredicted RBP29.86■■■□□ 2.37
CBX4-202ENST00000448310 INTS8Q75QN2 995 aaKnown RBP29.86■■■□□ 2.37
CBX4-202ENST00000448310 CYP2U1Q7Z449 544 aa29.86■■■□□ 2.37
CBX4-202ENST00000448310 CYFIP2Q96F07 1278 aa29.86■■■□□ 2.37
CBX4-202ENST00000448310 NT5C1AQ9BXI3 368 aa29.86■■■□□ 2.37
CBX4-202ENST00000448310 GOLPH3LQ9H4A5 285 aa29.86■■■□□ 2.37
CBX4-202ENST00000448310 NMUR1Q9HB89 426 aa29.86■■■□□ 2.37
CBX4-202ENST00000448310 DEC1Q9P2X7 70 aa29.86■■■□□ 2.37
CBX4-202ENST00000448310 NUDT5Q9UKK9 219 aa29.86■■■□□ 2.37
CBX4-202ENST00000448310 LNP1A1A4G5 178 aa29.85■■■□□ 2.37
CBX4-202ENST00000448310 PATE3B3GLJ2 98 aa29.85■■■□□ 2.37
CBX4-202ENST00000448310 GREM1O60565 184 aa29.85■■■□□ 2.37
CBX4-202ENST00000448310 KRT13P13646 458 aa29.85■■■□□ 2.37
CBX4-202ENST00000448310 ACO1P21399 889 aaKnown RBP29.85■■■□□ 2.37
CBX4-202ENST00000448310 NFIL3Q16649 462 aa29.85■■■□□ 2.37
CBX4-202ENST00000448310 C10orf76Q5T2E6 689 aa29.85■■■□□ 2.37
CBX4-202ENST00000448310 KRBA2Q6ZNG9 492 aa29.85■■■□□ 2.37
CBX4-202ENST00000448310 WHAMMQ8TF30 809 aa29.85■■■□□ 2.37
CBX4-202ENST00000448310 DUSP9Q99956 384 aaKnown RBP29.85■■■□□ 2.37
CBX4-202ENST00000448310 LSM14BQ9BX40 385 aaKnown RBP29.85■■■□□ 2.37
CBX4-202ENST00000448310 NIF3L1Q9GZT8 377 aa29.85■■■□□ 2.37
CBX4-202ENST00000448310 CYLDQ9NQC7 956 aa29.85■■■□□ 2.37
CBX4-202ENST00000448310 SCML2Q9UQR0 700 aa29.85■■■□□ 2.37
CBX4-202ENST00000448310 CEP192Q8TEP8 1941 aa29.84■■■□□ 2.37
CBX4-202ENST00000448310 TCRBV21S2A2A0A5A6 115 aa29.84■■■□□ 2.37
CBX4-202ENST00000448310 MDM4O15151 490 aa29.84■■■□□ 2.37
CBX4-202ENST00000448310 TRIM21P19474 475 aaKnown RBP29.84■■■□□ 2.37
CBX4-202ENST00000448310 P2RY2P41231 377 aa29.84■■■□□ 2.37
CBX4-202ENST00000448310 HTR3DQ70Z44 454 aa29.84■■■□□ 2.37
CBX4-202ENST00000448310 PGBD3Q8N328 593 aa29.84■■■□□ 2.37
CBX4-202ENST00000448310 ZNF513Q8N8E2 541 aaPredicted RBP29.84■■■□□ 2.37
CBX4-202ENST00000448310 TERB1Q8NA31 727 aa29.84■■■□□ 2.37
CBX4-202ENST00000448310 CYP3A43Q9HB55 503 aa29.84■■■□□ 2.37
CBX4-202ENST00000448310 HCN2Q9UL51 889 aa29.84■■■□□ 2.37
CBX4-202ENST00000448310 KMT2BQ9UMN6 2715 aaPredicted RBP29.84■■■□□ 2.37
CBX4-202ENST00000448310 A0A1W2PQH9 124 aa29.83■■■□□ 2.37
CBX4-202ENST00000448310 C4orf47A7E2U8 309 aa29.83■■■□□ 2.37
CBX4-202ENST00000448310 ATP5C1P36542 298 aaKnown RBP29.83■■■□□ 2.37
CBX4-202ENST00000448310 ADAM9Q13443 819 aa29.83■■■□□ 2.37
CBX4-202ENST00000448310 ARMCX6Q7L4S7 300 aa29.83■■■□□ 2.37
CBX4-202ENST00000448310 GUF1Q8N442 669 aaKnown RBP29.83■■■□□ 2.37
CBX4-202ENST00000448310 PIGKQ92643 395 aa29.83■■■□□ 2.37
CBX4-202ENST00000448310 PI4KAP42356 2102 aa29.83■■■□□ 2.37
CBX4-202ENST00000448310 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa29.82■■■□□ 2.36
CBX4-202ENST00000448310 NEDD8-MDP1E9PL57 170 aa29.82■■■□□ 2.36
CBX4-202ENST00000448310 KHNYNO15037 678 aaKnown RBP29.82■■■□□ 2.36
CBX4-202ENST00000448310 CILPO75339 1184 aa29.82■■■□□ 2.36
CBX4-202ENST00000448310 KCNK5O95279 499 aa29.82■■■□□ 2.36
CBX4-202ENST00000448310 RARGP13631 454 aa29.82■■■□□ 2.36
CBX4-202ENST00000448310 PSMC2P35998 433 aaKnown RBP29.82■■■□□ 2.36
CBX4-202ENST00000448310 WASP42768 502 aa29.82■■■□□ 2.36
CBX4-202ENST00000448310 TPGS1Q6ZTW0 290 aa29.82■■■□□ 2.36
CBX4-202ENST00000448310 MIB1Q86YT6 1006 aa29.82■■■□□ 2.36
CBX4-202ENST00000448310 TMEFF1Q8IYR6 380 aa29.82■■■□□ 2.36
CBX4-202ENST00000448310 EEF2KMTQ96G04 330 aa29.82■■■□□ 2.36
CBX4-202ENST00000448310 SPACA7Q96KW9 195 aa29.82■■■□□ 2.36
CBX4-202ENST00000448310 DNAJC17Q9NVM6 304 aaKnown RBP29.82■■■□□ 2.36
CBX4-202ENST00000448310 MBD1Q9UIS9 605 aaPredicted RBP29.82■■■□□ 2.36
CBX4-202ENST00000448310 MAP3K13O43283 966 aa29.81■■■□□ 2.36
CBX4-202ENST00000448310 RPL13P26373 211 aaKnown RBP29.81■■■□□ 2.36
CBX4-202ENST00000448310 MAP7D1Q3KQU3 841 aa29.81■■■□□ 2.36
CBX4-202ENST00000448310 ZCWPW2Q504Y3 356 aa29.81■■■□□ 2.36
CBX4-202ENST00000448310 ZNF394Q53GI3 561 aa29.81■■■□□ 2.36
CBX4-202ENST00000448310 GRAMD4Q6IC98 578 aa29.81■■■□□ 2.36
CBX4-202ENST00000448310 SMYD4Q8IYR2 804 aaPredicted RBP29.81■■■□□ 2.36
CBX4-202ENST00000448310 BBS2Q9BXC9 721 aa29.81■■■□□ 2.36
CBX4-202ENST00000448310 GDPD2Q9HCC8 539 aa29.81■■■□□ 2.36
CBX4-202ENST00000448310 TMEM8AQ9HCN3 771 aa29.81■■■□□ 2.36
CBX4-202ENST00000448310 MTPAPQ9NVV4 582 aaKnown RBP eCLIP29.81■■■□□ 2.364e-6■■□□□ 13.4
CBX4-202ENST00000448310 LSM7Q9UK45 103 aaKnown RBP29.81■■■□□ 2.36
CBX4-202ENST00000448310 PCDHA5Q9Y5H7 936 aa29.81■■■□□ 2.36
CBX4-202ENST00000448310 A0A1W2PQ27 194 aa29.8■■■□□ 2.36
CBX4-202ENST00000448310 A0A1W2PQ64 194 aa29.8■■■□□ 2.36
CBX4-202ENST00000448310 A0A1W2PQD8 194 aa29.8■■■□□ 2.36
CBX4-202ENST00000448310 TYRP14679 529 aa29.8■■■□□ 2.36
CBX4-202ENST00000448310 PMLP29590 882 aa29.8■■■□□ 2.36
CBX4-202ENST00000448310 PREPLQ4J6C6 727 aaPredicted RBP29.8■■■□□ 2.36
CBX4-202ENST00000448310 PPP1R26Q5T8A7 1209 aaPredicted RBP29.8■■■□□ 2.36
CBX4-202ENST00000448310 EGFLAMQ63HQ2 1017 aa29.8■■■□□ 2.36
CBX4-202ENST00000448310 PSAPL1Q6NUJ1 521 aa29.8■■■□□ 2.36
CBX4-202ENST00000448310 LPCAT2Q7L5N7 544 aa29.8■■■□□ 2.36
CBX4-202ENST00000448310 CCDC150Q8NCX0 1101 aa29.8■■■□□ 2.36
CBX4-202ENST00000448310 SEMA4DQ92854 862 aa29.8■■■□□ 2.36
CBX4-202ENST00000448310 ERLEC1Q96DZ1 483 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms