RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 C10orf76Q5T2E6 689 aa16.31■□□□□ 0.2
SEC13-213ENST00000445064 PSAPL1Q6NUJ1 521 aa16.31■□□□□ 0.2
SEC13-213ENST00000445064 HTR3DQ70Z44 454 aa16.31■□□□□ 0.2
SEC13-213ENST00000445064 ARMCX6Q7L4S7 300 aa16.31■□□□□ 0.2
SEC13-213ENST00000445064 LPCAT2Q7L5N7 544 aa16.31■□□□□ 0.2
SEC13-213ENST00000445064 ZNF513Q8N8E2 541 aaPredicted RBP16.31■□□□□ 0.2
SEC13-213ENST00000445064 CYFIP2Q96F07 1278 aa16.31■□□□□ 0.2
SEC13-213ENST00000445064 SPATA32Q96LK8 384 aa16.31■□□□□ 0.2
SEC13-213ENST00000445064 HNRNPABQ99729 332 aaKnown RBP16.31■□□□□ 0.2
SEC13-213ENST00000445064 APOBEC3GQ9HC16 384 aaKnown RBP16.31■□□□□ 0.2
SEC13-213ENST00000445064 MBD1Q9UIS9 605 aaPredicted RBP16.31■□□□□ 0.2
SEC13-213ENST00000445064 NUDT5Q9UKK9 219 aa16.31■□□□□ 0.2
SEC13-213ENST00000445064 ANGPTL2Q9UKU9 493 aa16.31■□□□□ 0.2
SEC13-213ENST00000445064 HCN2Q9UL51 889 aa16.31■□□□□ 0.2
SEC13-213ENST00000445064 NUP205Q92621 2012 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 HHLA1C9JL84 531 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 CDX4O14627 284 aaPredicted RBP16.3■□□□□ 0.2
SEC13-213ENST00000445064 MYL1P05976 194 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 TRIM49P0CI25 452 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 TRIM49CP0CI26 452 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 ACO1P21399 889 aaKnown RBP16.3■□□□□ 0.2
SEC13-213ENST00000445064 PTGER3P43115 390 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 SYKP43405 635 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 NDUFA8P51970 172 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 PPP3CAQ08209 521 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 MAP7D1Q3KQU3 841 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 PREPLQ4J6C6 727 aaPredicted RBP16.3■□□□□ 0.2
SEC13-213ENST00000445064 DAB2IPQ5VWQ8 1189 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 TPGS1Q6ZTW0 290 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 CLEC20AQ6ZU45 233 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 NUDT18Q6ZVK8 323 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 TAS1R2Q8TE23 839 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 SPACA7Q96KW9 195 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 DUSP9Q99956 384 aaKnown RBP16.3■□□□□ 0.2
SEC13-213ENST00000445064 MMRN2Q9H8L6 949 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 NMUR1Q9HB89 426 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 TMEM74BQ9NUR3 256 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 SCML2Q9UQR0 700 aa16.3■□□□□ 0.2
SEC13-213ENST00000445064 A0A1W2PQH9 124 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 NEDD8-MDP1E9PL57 170 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 MDM4O15151 490 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 MAPK13O15264 365 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 CYP26A1O43174 497 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 RHOBTB3O94955 611 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 KIF20AO95235 890 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 CD58P19256 250 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 TRIM21P19474 475 aaKnown RBP16.29■□□□□ 0.2
SEC13-213ENST00000445064 NR2F2P24468 414 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 NOVA1P51513 510 aaKnown RBP16.29■□□□□ 0.2
SEC13-213ENST00000445064 INCA1Q0VD86 236 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 MIB1Q86YT6 1006 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 DEFB119Q8N690 84 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 TERB1Q8NA31 727 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 KCNV2Q8TDN2 545 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 CCDC47Q96A33 483 aaKnown RBP16.29■□□□□ 0.2
SEC13-213ENST00000445064 ERLEC1Q96DZ1 483 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 ACOX2Q99424 681 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 BBS2Q9BXC9 721 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 NT5C1AQ9BXI3 368 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 TMEM9BQ9NQ34 198 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 CYLDQ9NQC7 956 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 DNAJC17Q9NVM6 304 aaKnown RBP16.29■□□□□ 0.2
SEC13-213ENST00000445064 ZDHHC9Q9Y397 364 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 MYH10P35580 1976 aa16.29■□□□□ 0.2
SEC13-213ENST00000445064 RARGP13631 454 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 KRT13P13646 458 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 HOXB2P14652 356 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 TYRP14679 529 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 GABRG2P18507 467 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 NTSR1P30989 418 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 KRT85P78386 507 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 DPYDQ12882 1025 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 BYSLQ13895 437 aaKnown RBP16.28■□□□□ 0.2
SEC13-213ENST00000445064 UAP1L1Q3KQV9 507 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 ZNF394Q53GI3 561 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 TRIM61Q5EBN2 209 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 SH3PXD2AQ5TCZ1 1133 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 EGFLAMQ63HQ2 1017 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 GRAMD4Q6IC98 578 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 INTS8Q75QN2 995 aaKnown RBP16.28■□□□□ 0.2
SEC13-213ENST00000445064 TRMT11Q7Z4G4 463 aaKnown RBP16.28■□□□□ 0.2
SEC13-213ENST00000445064 FAM186BQ8IYM0 893 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 XPO6Q96QU8 1125 aaKnown RBP16.28■□□□□ 0.2
SEC13-213ENST00000445064 IMPG2Q9BZV3 1241 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 CYP3A43Q9HB55 503 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.28■□□□□ 0.2
SEC13-213ENST00000445064 LSM7Q9UK45 103 aaKnown RBP16.28■□□□□ 0.2
SEC13-213ENST00000445064 STARD13Q9Y3M8 1113 aa16.28■□□□□ 0.2
SEC13-213ENST00000445064 PRRT4C9JH25 899 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 CILPO75339 1184 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 PSMC2P35998 433 aaKnown RBP16.27■□□□□ 0.2
SEC13-213ENST00000445064 PLA2G4AP47712 749 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 SHC2P98077 582 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 GOLGA8FQ08AF8 430 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 GOLGA8DPQ0D2H9 430 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 ADAM9Q13443 819 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 NFIL3Q16649 462 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 C10orf120Q5SQS8 335 aa16.27■□□□□ 0.2
SEC13-213ENST00000445064 PPP1R26Q5T8A7 1209 aaPredicted RBP16.27■□□□□ 0.2
SEC13-213ENST00000445064 TOGARAM2Q6ZUX3 1019 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms