RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 MPLP40238 635 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 CACNA2D1P54289 1103 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 SOX10P56693 466 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 RPS7P62081 194 aaKnown RBP3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 HMGN5P82970 282 aaKnown RBP3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 FOXI1Q12951 378 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZNF267Q14586 743 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZNF169Q14929 603 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 SEPT2Q15019 361 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 CYP2A13Q16696 494 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 IMMTQ16891 758 aaKnown RBP3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 PARP10Q53GL7 1025 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 ERAP2Q6P179 960 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 STOX1Q6ZVD7 989 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 FBXL16Q8N461 479 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 FAM184AQ8NB25 1140 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 TTC17Q96AE7 1141 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZNF274Q96GC6 653 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 UTP14AQ9BVJ6 771 aaKnown RBP3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 UBA5Q9GZZ9 404 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 SIK2Q9H0K1 926 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZSCAN16Q9H4T2 348 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 GSTO2Q9H4Y5 243 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 C1orf112Q9NSG2 853 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 INTS13Q9NVM9 706 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 FBXO34Q9NWN3 711 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 CALCOCO1Q9P1Z2 691 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 SLC23A1Q9UHI7 598 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 INTUQ9ULD6 942 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZBTB1Q9Y2K1 713 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 KIF3AQ9Y496 699 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 CFAP20Q9Y6A4 193 aaKnown RBP3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 SPATA31A1Q5TZJ5 1347 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 MROH5Q6ZUA9 1318 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 NUP188Q5SRE5 1749 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 ABCA3Q99758 1704 aa3.9□□□□□ -1.79
HMGB3P11-201ENST00000440127 LRP6O75581 1613 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 AFDNP55196 1824 aaKnown RBP3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 PRAMEF33A0A0G2JMD5 474 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 TCRBV7S2A1N4TA0A589 114 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 GOLGA6L4A6NEF3 574 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 H3BQV1 296 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 ZNF213O14771 459 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 PMM2O15305 246 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 AP1G1O43747 822 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 JAK2O60674 1132 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 PRAMEF10O60809 474 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 PROP1O75360 226 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 ARIH2O95376 493 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 FGAP02671 866 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 ELANEP08246 267 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 KCNA2P16389 499 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 RHCEP18577 417 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 C5AR1P21730 350 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 SLC6A2P23975 617 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 LMO1P25800 156 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 FOLR3P41439 243 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 SLC6A9P48067 706 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 PTTG1IPP53801 180 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 EIF5P55010 431 aaKnown RBP3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 EVCP57679 992 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 RHDQ02161 417 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 GRAMD1BQ3KR37 738 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 FAM83BQ5T0W9 1011 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 IFIT1BQ5T764 474 aaKnown RBP3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 THEMIS2Q5TEJ8 643 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 SUSD4Q5VX71 490 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 TTLL5Q6EMB2 1281 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 NAA16Q6N069 864 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 TOGARAM2Q6ZUX3 1019 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 VGLL2Q8N8G2 317 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 NCOA7Q8NI08 942 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 NRG4Q8WWG1 115 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 LPIN2Q92539 896 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 GJA10Q969M2 543 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 PDLIM2Q96JY6 352 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 ELAC2Q9BQ52 826 aaKnown RBP3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 AGXT2Q9BYV1 514 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 UNKLQ9H9P5 680 aaKnown RBP3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 JKAMPQ9P055 326 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 CFAP45Q9UL16 551 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 PHTF1Q9UMS5 762 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 FAM50BQ9Y247 325 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 DAAM1Q9Y4D1 1078 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 AK9Q5TCS8 1911 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 TJP1Q07157 1748 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 SHANK3Q9BYB0 1731 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 ELP1O95163 1332 aa3.89□□□□□ -1.79
HMGB3P11-201ENST00000440127 AHDC1Q5TGY3 1603 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 TOGARAM1Q9Y4F4 1720 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 A0A0G2JLW4 131 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 CCDC195A0A1B0GUA6 201 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 TPP1O14773 563 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 GRM6O15303 877 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 MPPED1O15442 326 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 GPAA1O43292 621 aa3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 DHX16O60231 1041 aaKnown RBP3.88□□□□□ -1.79
HMGB3P11-201ENST00000440127 NDUFS2O75306 463 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms