RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 CSTBP04080 98 aaKnown RBP4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 ARP10275 920 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 JUPP14923 745 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 NPPBP16860 134 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 ENGP17813 658 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 WT1P19544 449 aaPredicted RBP4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 NTSR1P30989 418 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 E2F1Q01094 437 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 ACOX1Q15067 660 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 ELF2Q15723 593 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 CCDC38Q502W7 563 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 FAM83BQ5T0W9 1011 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 AKNAD1Q5T1N1 836 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 CEP85Q6P2H3 762 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 GGT6Q6P531 493 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 RINLQ6ZS11 566 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 SLC29A4Q7RTT9 530 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 NRSN1Q8IZ57 195 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 C11orf44Q8N8P7 122 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 FAM71BQ8TC56 605 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 UROC1Q96N76 676 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 PRR25Q96S07 402 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 OBP2BQ9NPH6 170 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 ST3GAL5Q9UNP4 418 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 DMRT1Q9Y5R6 373 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 PNMA6EA0A0J9YXQ4 647 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 H0YIZ8 118 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 AGPSO00116 658 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 NPC1O15118 1278 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 JTBO76095 146 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 LMNAP02545 664 aaKnown RBP4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 ITGA5P08648 1049 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 PECAM1P16284 738 aaPredicted RBP4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 ZNF37AP17032 561 aaPredicted RBP4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 GPD1P21695 349 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 PROZP22891 400 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 MMP8P22894 467 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 ADRA1DP25100 572 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 CTGFP29279 349 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 PLA2G5P39877 138 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 ALDH18A1P54886 795 aaKnown RBP4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 FOXO1Q12778 655 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 TRIM14Q14142 442 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 CSHL1Q14406 222 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 ZRSR2Q15696 482 aaKnown RBP4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 CYP1B1Q16678 543 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 ARHGAP15Q53QZ3 475 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 L1TD1Q5T7N2 865 aaKnown RBP4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 GORABQ5T7V8 394 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 TSTD2Q5T7W7 516 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 SIMC1Q8NDZ2 872 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 IPO4Q8TEX9 1081 aaKnown RBP4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 CTHRC1Q96CG8 243 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 C18orf8Q96DM3 657 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 CHFRQ96EP1 664 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 SORCS2Q96PQ0 1159 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 WDR24Q96S15 920 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 RMDN3Q96TC7 470 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 EIF3CQ99613 913 aaKnown RBP4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 HERPUD2Q9BSE4 406 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 PAGR1Q9BTK6 254 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 CINPQ9BW66 212 aaPredicted RBP4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 KRTAP9-3Q9BYQ3 159 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 SCAND2PQ9GZW5 306 aaPredicted RBP4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 TMPRSS5Q9H3S3 457 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 MYH16Q9H6N6 1097 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 NFU1Q9UMS0 254 aa4.4□□□□□ -1.71
LSM1P1-201ENST00000438629 PLEKHD1A6NEE1 506 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 SYT5O00445 386 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 SPRY2O43597 315 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 FGAP02671 866 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 ITGA2BP08514 1039 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 PCSK6P29122 969 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 SERPINF1P36955 418 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 GSTM5P46439 218 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 ELLP55199 621 aaPredicted RBP4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 HOXA4Q00056 320 aaPredicted RBP4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 KCNJ12Q14500 433 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 ATPAF1Q5TC12 328 aaPredicted RBP4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 STRIP1Q5VSL9 837 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 RASAL3Q86YV0 1011 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 P3H2Q8IVL5 708 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 METTL25Q8N6Q8 603 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 PNPLA1Q8N8W4 532 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 FAM71DQ8N9W8 422 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 SPATA5Q8NB90 893 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 CCT6BQ92526 530 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 NELL1Q92832 810 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 THAP7Q9BT49 309 aaPredicted RBP4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 TP63Q9H3D4 680 aaPredicted RBP4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 AS3MTQ9HBK9 375 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 CPNE5Q9HCH3 593 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 DACT1Q9NYF0 836 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 IGSF9Q9P2J2 1179 aa4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 HERC5Q9UII4 1024 aaKnown RBP4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 ING1Q9UK53 422 aaPredicted RBP4.39□□□□□ -1.71
LSM1P1-201ENST00000438629 LGALS16A8MUM7 142 aa4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 AKAP8O43823 692 aaKnown RBP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 HNRNPCP07910 306 aaKnown RBP eCLIP4.38□□□□□ -1.71
LSM1P1-201ENST00000438629 ANXA6P08133 673 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms