RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 NIF3L1Q9GZT8 377 aa10.85□□□□□ -0.67
ZNF3-208ENST00000428683 SPHK2Q9NRA0 654 aa10.85□□□□□ -0.67
ZNF3-208ENST00000428683 DEC1Q9P2X7 70 aa10.85□□□□□ -0.67
ZNF3-208ENST00000428683 GREB1Q4ZG55 1949 aa10.85□□□□□ -0.67
ZNF3-208ENST00000428683 GOLGA6L4A6NEF3 574 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.84□□□□□ -0.67
ZNF3-208ENST00000428683 CETN3O15182 167 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 FOXD2O60548 495 aaPredicted RBP10.84□□□□□ -0.67
ZNF3-208ENST00000428683 ALDH1A2O94788 518 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 CAVIN2O95810 425 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 BCKDHBP21953 392 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 PRCPP42785 496 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 TNFRSF4P43489 277 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 KIR2DL1P43626 348 aaPredicted RBP10.84□□□□□ -0.67
ZNF3-208ENST00000428683 DHPSP49366 369 aaPredicted RBP10.84□□□□□ -0.67
ZNF3-208ENST00000428683 TUBP50607 506 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 ZCWPW2Q504Y3 356 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 PLA2G2CQ5R387 149 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 TCERG1LQ5VWI1 586 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 ISM2Q6H9L7 571 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 HTR3DQ70Z44 454 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 RASSF3Q86WH2 238 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 BHMTQ93088 406 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 CCDC34Q96HJ3 373 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 CNOT6LQ96LI5 555 aaKnown RBP10.84□□□□□ -0.67
ZNF3-208ENST00000428683 DUSP16Q9BY84 665 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 POLMQ9NP87 494 aaPredicted RBP10.84□□□□□ -0.67
ZNF3-208ENST00000428683 VPS45Q9NRW7 570 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 RAB20Q9NX57 234 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 BCCIPQ9P287 314 aaKnown RBP eCLIP10.84□□□□□ -0.67
ZNF3-208ENST00000428683 NAGPAQ9UK23 515 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 SCML2Q9UQR0 700 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 PCDHGA5Q9Y5G8 931 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 DNAH14Q0VDD8 3507 aa10.84□□□□□ -0.67
ZNF3-208ENST00000428683 SPTBN2O15020 2390 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 BCLAF3A2AJT9 711 aaKnown RBP10.83□□□□□ -0.68
ZNF3-208ENST00000428683 NEDD8-MDP1E9PL57 170 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 MAP3K13O43283 966 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 GREM1O60565 184 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 ADAM23O75077 832 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 HMBSP08397 361 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 EPB41P11171 864 aaKnown RBP10.83□□□□□ -0.68
ZNF3-208ENST00000428683 GTF2H1P32780 548 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 PLA2G4AP47712 749 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 MXI1P50539 228 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 KIF11P52732 1056 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 EDRF1Q3B7T1 1238 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 DCAF17Q5H9S7 520 aaPredicted RBP10.83□□□□□ -0.68
ZNF3-208ENST00000428683 EOGTQ5NDL2 527 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 C10orf120Q5SQS8 335 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 C10orf76Q5T2E6 689 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 STPG1Q5TH74 334 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 ANKRD40Q6AI12 368 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 SCD5Q86SK9 330 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 MIB1Q86YT6 1006 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 ETFBKMTQ8IXQ9 262 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 FMR1NBQ8N0W7 255 aaPredicted RBP10.83□□□□□ -0.68
ZNF3-208ENST00000428683 PHTF2Q8N3S3 785 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 ZNF513Q8N8E2 541 aaPredicted RBP10.83□□□□□ -0.68
ZNF3-208ENST00000428683 SLC4A11Q8NBS3 891 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 FBXL13Q8NEE6 735 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 HMGB4Q8WW32 186 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 TMEM176AQ96HP8 235 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 CNTNAP3BQ96NU0 1288 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 ARID3AQ99856 593 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 BBS2Q9BXC9 721 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 CNTNAP3Q9BZ76 1288 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 DNAI2Q9GZS0 605 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 CYLDQ9NQC7 956 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 CISHQ9NSE2 258 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 DNAJC17Q9NVM6 304 aaKnown RBP10.83□□□□□ -0.68
ZNF3-208ENST00000428683 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.83□□□□□ -0.68
ZNF3-208ENST00000428683 PLK2Q9NYY3 685 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 DNMT3LQ9UJW3 386 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 LSM7Q9UK45 103 aaKnown RBP10.83□□□□□ -0.68
ZNF3-208ENST00000428683 PCDHA5Q9Y5H7 936 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 PTPRDP23468 1912 aa10.83□□□□□ -0.68
ZNF3-208ENST00000428683 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 TCRBV21S2A2A0A5A6 115 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 PATE3B3GLJ2 98 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 HOXC11O43248 304 aaPredicted RBP10.82□□□□□ -0.68
ZNF3-208ENST00000428683 STX10O60499 249 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 ADRB1P08588 477 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 CHRM1P11229 460 aaPredicted RBP10.82□□□□□ -0.68
ZNF3-208ENST00000428683 RALAP11233 206 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 TYRP14679 529 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 PMS1P54277 932 aaKnown RBP10.82□□□□□ -0.68
ZNF3-208ENST00000428683 RAD23BP54727 409 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 ENPEPQ07075 957 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 GOLGA8FQ08AF8 430 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 GOLGA8DPQ0D2H9 430 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 EFEMP1Q12805 493 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 LRMPQ12912 555 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 CBWD6Q4V339 395 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 CBWD3Q5JTY5 395 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 CBWD5Q5RIA9 395 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 ZNF658Q5TYW1 1059 aaPredicted RBP10.82□□□□□ -0.68
ZNF3-208ENST00000428683 PMS2CLQ68D20 193 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 RNF43Q68DV7 783 aa10.82□□□□□ -0.68
ZNF3-208ENST00000428683 GRAMD4Q6IC98 578 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms