RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 CENPIQ92674 756 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-210ENST00000428307 GLT1D1Q96MS3 346 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 C11orf84Q9BUA3 381 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-210ENST00000428307 RHOBTB2Q9BYZ6 727 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 FRMD8P1Q9BZ68 369 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-210ENST00000428307 FAM107BQ9H098 131 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 TMEM30AQ9NV96 361 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 TCRBV7S3A2A0A539 114 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 APOL1O14791 398 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 MDM4O15151 490 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 AP1G2O75843 785 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 YY1P25490 414 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 L1CAMP32004 1257 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 MATKP42679 507 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 CACNA2D1P54289 1103 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 BASP1P80723 227 aaKnown RBP10.84□□□□□ -0.67
HDAC9-210ENST00000428307 MRPS5P82675 430 aaKnown RBP10.84□□□□□ -0.67
HDAC9-210ENST00000428307 ROR1Q01973 937 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 NME3Q13232 169 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 NOMO1Q15155 1222 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 SYPL2Q5VXT5 272 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 HFE2Q6ZVN8 426 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 TEKT4Q8WW24 435 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 CPT1BQ92523 772 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 PRCCQ92733 491 aaPredicted RBP10.84□□□□□ -0.67
HDAC9-210ENST00000428307 SELENOSQ9BQE4 189 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 TMEM109Q9BVC6 243 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 CYLDQ9NQC7 956 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 TMPRSS4Q9NRS4 437 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 RSPH14Q9UHP6 348 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 AP4E1Q9UPM8 1137 aa10.84□□□□□ -0.67
HDAC9-210ENST00000428307 RALGAPA2Q2PPJ7 1873 aa10.83□□□□□ -0.67
HDAC9-210ENST00000428307 A6NNZ2 444 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 NRP1O14786 923 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 RPLP2P05387 115 aaKnown RBP10.83□□□□□ -0.68
HDAC9-210ENST00000428307 ITGB1P05556 798 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 CYP2F1P24903 491 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 HOXD10P28358 340 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 RPL9P32969 192 aaKnown RBP10.83□□□□□ -0.68
HDAC9-210ENST00000428307 SULT1E1P49888 294 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 PDIA2Q13087 525 aaKnown RBP10.83□□□□□ -0.68
HDAC9-210ENST00000428307 DSC3Q14574 896 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 TUBB8Q3ZCM7 444 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 MAP3K21Q5TCX8 1036 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 ANKMY2Q8IV38 441 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 CCDC13Q8IYE1 715 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 TMEM86AQ8N2M4 240 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 ADAM32Q8TC27 787 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 SMOQ99835 787 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 ROPN1BQ9BZX4 212 aaPredicted RBP10.83□□□□□ -0.68
HDAC9-210ENST00000428307 ROPN1Q9HAT0 212 aaPredicted RBP10.83□□□□□ -0.68
HDAC9-210ENST00000428307 KCNN4O15554 427 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 AGTP01019 485 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 CKBP12277 381 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 RBL1P28749 1068 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 STIP1P31948 543 aaKnown RBP10.83□□□□□ -0.68
HDAC9-210ENST00000428307 RAB27AP51159 221 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 HIF1AQ16665 826 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 TRIM71Q2Q1W2 868 aaKnown RBP10.83□□□□□ -0.68
HDAC9-210ENST00000428307 SLC25A52Q3SY17 297 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 GPRIN1Q7Z2K8 1008 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 FAM35AQ86V20 835 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 PPIL6Q8IXY8 311 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 MRRFQ96E11 262 aaKnown RBP10.83□□□□□ -0.68
HDAC9-210ENST00000428307 ULBP1Q9BZM6 244 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 NRDE2Q9H7Z3 1164 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 CREBZFQ9NS37 354 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 MTMR10Q9NXD2 777 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 NAALADL1Q9UQQ1 740 aa10.83□□□□□ -0.68
HDAC9-210ENST00000428307 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
HDAC9-210ENST00000428307 YJEFN3A6XGL0 299 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 E7ENQ6 273 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 E7EVH7 732 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 M0QYT0 321 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 NDUFAB1O14561 156 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 CAPN9O14815 690 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 TOMM70O94826 608 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 IVLP07476 585 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 USP17L7P0C7H9 530 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 CREB1P16220 341 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 GOT1P17174 413 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 SCNN1AP37088 669 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 CCT5P48643 541 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 GBE1Q04446 702 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 DPYSL2Q16555 572 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 MSS51Q4VC12 460 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 FNBP1LQ5T0N5 605 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 SLC9A4Q6AI14 798 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 CENPUQ71F23 418 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 ARCQ7LC44 396 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 CROCCP2Q86T23 111 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 RTN4RL1Q86UN2 441 aaPredicted RBP10.82□□□□□ -0.68
HDAC9-210ENST00000428307 EXOC3L1Q86VI1 746 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 RELL1Q8IUW5 271 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 NAT8LQ8N9F0 302 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 NETO2Q8NC67 525 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 ZMIZ2Q8NF64 920 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 MYCBPAPQ8TBZ2 947 aa10.82□□□□□ -0.68
HDAC9-210ENST00000428307 ARHGEF2Q92974 986 aaKnown RBP10.82□□□□□ -0.68
HDAC9-210ENST00000428307 PGBD4Q96DM1 585 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms