RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TAB3Q8N5C8 712 aaPredicted RBP22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 PLD5Q8N7P1 536 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 SMOQ99835 787 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 ZNF670Q9BS34 389 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 MAGEB5Q9BZ81 275 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 SQORQ9Y6N5 450 aa22.67■■□□□ 1.22
CNEP1R1-202ENST00000427478 RPL22P35268 128 aaKnown RBP22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 CTCFP49711 727 aaPredicted RBP22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 CACNA2D1P54289 1103 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 PPP2R2AP63151 447 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 LONRF1Q17RB8 773 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 DCAF6Q58WW2 860 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 C6orf118Q5T5N4 469 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 LHX8Q68G74 356 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 STRADAQ7RTN6 431 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 CROCCP2Q86T23 111 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 MYCBPAPQ8TBZ2 947 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 KCNK16Q96T55 309 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 SAYSD1Q9NPB0 183 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 TMEM30AQ9NV96 361 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 SHOC2Q9UQ13 582 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 HEY1Q9Y5J3 304 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 H7C0C1 242 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 EIF3HO15372 352 aaKnown RBP eCLIP22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 PCSK1P29120 753 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 L1CAMP32004 1257 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 ATP5OP48047 213 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 NRLP54845 237 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 YWHAZP63104 245 aaKnown RBP22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 MBTPS1Q14703 1052 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 DPYSL2Q16555 572 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 SLC25A52Q3SY17 297 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 SLC9A4Q6AI14 798 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 TRAF7Q6Q0C0 670 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 CD300LGQ6UXG3 332 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 ZNF598Q86UK7 904 aaKnown RBP22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 RELL1Q8IUW5 271 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 PRCCQ92733 491 aaPredicted RBP22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 RTP3Q9BQQ7 232 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 HMX1Q9NP08 348 aaPredicted RBP22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 STARD7Q9NQZ5 370 aa22.66■■□□□ 1.22
CNEP1R1-202ENST00000427478 MAP3K6O95382 1288 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 TGM2P21980 687 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 CYP2F1P24903 491 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 MAGEA4P43358 317 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 BCAR1P56945 870 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 PITX1P78337 314 aaPredicted RBP22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 ZSCAN26Q16670 478 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 CEP128Q6ZU80 1094 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 GPRIN1Q7Z2K8 1008 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 FAM131BQ86XD5 332 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 VSIG1Q86XK7 387 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 ZMIZ2Q8NF64 920 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 RHOBTB2Q9BYZ6 727 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 ULBP1Q9BZM6 244 aa22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 FARP1Q9Y4F1 1045 aaPredicted RBP22.65■■□□□ 1.22
CNEP1R1-202ENST00000427478 SYNJ2BP-COX16A0A087WUM0 186 aa22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 GOLGA8MH3BSY2 632 aa22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 NDC80O14777 642 aa22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 YY1P25490 414 aa22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 MDH1P40925 334 aaKnown RBP22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 OTUD1Q5VV17 481 aaPredicted RBP22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 HFE2Q6ZVN8 426 aa22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 PCGF5Q86SE9 256 aa22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 METTL23Q86XA0 190 aa22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 MYLPFQ96A32 169 aa22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 FAF2Q96CS3 445 aa22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 KCTD15Q96SI1 283 aaPredicted RBP22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 TSEN34Q9BSV6 310 aaKnown RBP22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 COX16Q9P0S2 106 aa22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 PTCH2Q9Y6C5 1203 aa22.64■■□□□ 1.22
CNEP1R1-202ENST00000427478 ZNF638Q14966 1978 aaKnown RBP22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 F8W810 466 aa22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 NRP1O14786 923 aa22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 ITGB1P05556 798 aa22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 NOS2P35228 1153 aa22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 IFI35P80217 286 aaPredicted RBP22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 AUHQ13825 339 aaKnown RBP22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 ANKRD22Q5VYY1 191 aa22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 RTN4RL1Q86UN2 441 aaPredicted RBP22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 CPT1BQ92523 772 aa22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 ROPN1BQ9BZX4 212 aaPredicted RBP22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 RABEP2Q9H5N1 569 aa22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 NRDE2Q9H7Z3 1164 aa22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 ROPN1Q9HAT0 212 aaPredicted RBP22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 RGS18Q9NS28 235 aa22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 MTMR10Q9NXD2 777 aa22.64■■□□□ 1.21
CNEP1R1-202ENST00000427478 A6NNZ2 444 aa22.63■■□□□ 1.21
CNEP1R1-202ENST00000427478 GNRH1P01148 92 aa22.63■■□□□ 1.21
CNEP1R1-202ENST00000427478 TUBB8Q3ZCM7 444 aa22.63■■□□□ 1.21
CNEP1R1-202ENST00000427478 HP1BP3Q5SSJ5 553 aaPredicted RBP22.63■■□□□ 1.21
CNEP1R1-202ENST00000427478 SYPL2Q5VXT5 272 aa22.63■■□□□ 1.21
CNEP1R1-202ENST00000427478 PPIL6Q8IXY8 311 aa22.63■■□□□ 1.21
CNEP1R1-202ENST00000427478 SMARCD1Q96GM5 515 aa22.63■■□□□ 1.21
CNEP1R1-202ENST00000427478 UROC1Q96N76 676 aa22.63■■□□□ 1.21
CNEP1R1-202ENST00000427478 SLC12A6Q9UHW9 1150 aa22.63■■□□□ 1.21
CNEP1R1-202ENST00000427478 GAD2Q05329 585 aa22.63■■□□□ 1.21
CNEP1R1-202ENST00000427478 FASTKD3Q14CZ7 662 aaKnown RBP22.63■■□□□ 1.21
CNEP1R1-202ENST00000427478 FAM182AQ5T1J6 154 aa22.63■■□□□ 1.21
CNEP1R1-202ENST00000427478 CTU1Q7Z7A3 348 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms