RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 AQP12BA6NM10 295 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 LGALS16A8MUM7 142 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 SLC16A3O15427 465 aaKnown RBP2.86□□□□□ -1.95
PTPRC-208ENST00000427110 ZSCAN9O15535 394 aaPredicted RBP2.86□□□□□ -1.95
PTPRC-208ENST00000427110 USP1O94782 785 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 NXPH3O95157 252 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 HNRNPCP07910 306 aaKnown RBP eCLIP2.86□□□□□ -1.95
PTPRC-208ENST00000427110 NHLRC4P0CG21 123 aaPredicted RBP2.86□□□□□ -1.95
PTPRC-208ENST00000427110 SRGAP2BP0DMP2 458 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 EGR1P18146 543 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 NTSR1P30989 418 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 UQCRC1P31930 480 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 GATMP50440 423 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 BCAT1P54687 386 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 TPTEP56180 551 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 NHLH1Q02575 133 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 SRSF4Q08170 494 aaKnown RBP2.86□□□□□ -1.95
PTPRC-208ENST00000427110 FOXF2Q12947 444 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 DHX8Q14562 1220 aaKnown RBP2.86□□□□□ -1.95
PTPRC-208ENST00000427110 MAPKAPK3Q16644 382 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 PFKFB4Q16877 469 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 ZACNQ401N2 412 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 FAM153CQ494X1 144 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 ZNF618Q5T7W0 954 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 MANEALQ5VSG8 457 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 RAP1GAP2Q684P5 730 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 MRNIPQ6NTE8 343 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 ERAP2Q6P179 960 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 ZNF782Q6ZMW2 699 aaPredicted RBP2.86□□□□□ -1.95
PTPRC-208ENST00000427110 CAND1Q86VP6 1230 aaKnown RBP2.86□□□□□ -1.95
PTPRC-208ENST00000427110 GATAD2AQ86YP4 633 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 SMC5Q8IY18 1101 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 ABRAQ8N0Z2 381 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 LRRC71Q8N4P6 559 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 C11orf44Q8N8P7 122 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 CYP2W1Q8TAV3 490 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 ABHD5Q8WTS1 349 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 GLG1Q92896 1179 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 FAM227BQ96M60 508 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 PRPF18Q99633 342 aaKnown RBP2.86□□□□□ -1.95
PTPRC-208ENST00000427110 MACROD1Q9BQ69 325 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 CHMP4AQ9BY43 222 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 TRIM5Q9C035 493 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 INO80BQ9C086 356 aaPredicted RBP2.86□□□□□ -1.95
PTPRC-208ENST00000427110 ZBTB26Q9HCK0 441 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 NECTIN3Q9NQS3 549 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 ARHGEF3Q9NR81 526 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 SH3BP4Q9P0V3 963 aa2.86□□□□□ -1.95
PTPRC-208ENST00000427110 DRG1Q9Y295 367 aaKnown RBP2.86□□□□□ -1.95
PTPRC-208ENST00000427110 MORC2Q9Y6X9 1032 aaPredicted RBP2.86□□□□□ -1.95
PTPRC-208ENST00000427110 DNAJC9-AS1A6NH13 148 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 SMIM22K7EJ46 135 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 EXOC5O00471 708 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 TRIM38O00635 465 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 ASNA1O43681 348 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 PROP1O75360 226 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 TNFRSF6BO95407 300 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 VIPP01282 170 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 CSTBP04080 98 aaKnown RBP2.85□□□□□ -1.95
PTPRC-208ENST00000427110 IL6RP08887 468 aaPredicted RBP2.85□□□□□ -1.95
PTPRC-208ENST00000427110 NDUFB7P17568 137 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 WT1P19544 449 aaPredicted RBP2.85□□□□□ -1.95
PTPRC-208ENST00000427110 MST1P26927 711 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 RBL1P28749 1068 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 PDIA3P30101 505 aaKnown RBP2.85□□□□□ -1.95
PTPRC-208ENST00000427110 HALP42357 657 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 PPM1FP49593 454 aaPredicted RBP2.85□□□□□ -1.95
PTPRC-208ENST00000427110 ATXN1P54253 815 aaKnown RBP2.85□□□□□ -1.95
PTPRC-208ENST00000427110 ALDH18A1P54886 795 aaKnown RBP2.85□□□□□ -1.95
PTPRC-208ENST00000427110 SUMO2P61956 95 aaKnown RBP2.85□□□□□ -1.95
PTPRC-208ENST00000427110 TFF2Q03403 129 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 NSUN2Q08J23 767 aaKnown RBP eCLIP2.85□□□□□ -1.95
PTPRC-208ENST00000427110 BMPR2Q13873 1038 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 SPARCL1Q14515 664 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 KRT72Q14CN4 511 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 SLC5A9Q2M3M2 681 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 P3H1Q32P28 736 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 TUBB8Q3ZCM7 444 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 PLAC9Q5JTB6 97 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 TMTC4Q5T4D3 741 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 ARL6IP4Q66PJ3 421 aaKnown RBP2.85□□□□□ -1.95
PTPRC-208ENST00000427110 FCRLBQ6BAA4 426 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 CLEC9AQ6UXN8 241 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 KIAA0408Q6ZU52 694 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 DTX2Q86UW9 622 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 KRT73Q86Y46 540 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 RASGRP3Q8IV61 690 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 SRRM1Q8IYB3 904 aaKnown RBP2.85□□□□□ -1.95
PTPRC-208ENST00000427110 STYXQ8WUJ0 223 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 SCLT1Q96NL6 688 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 RMDN3Q96TC7 470 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 SH2D3AQ9BRG2 576 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 PAGR1Q9BTK6 254 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 VN1R3Q9BXE9 311 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 MYLK2Q9H1R3 596 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 EPS8L2Q9H6S3 715 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 OBP2BQ9NPH6 170 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 DACT1Q9NYF0 836 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 RNF7Q9UBF6 113 aa2.85□□□□□ -1.95
PTPRC-208ENST00000427110 RGS17Q9UGC6 210 aaPredicted RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms