RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 NDUFA10O95299 355 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 IPO7O95373 1038 aaKnown RBP18.38■□□□□ 0.53
LINC00271-201ENST00000421378 GLI1P08151 1106 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 MYBL1P10243 752 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 RALAP11233 206 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 ABCB4P21439 1286 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 RRM1P23921 792 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 YWHAZP63104 245 aaKnown RBP18.38■□□□□ 0.53
LINC00271-201ENST00000421378 MTF1Q14872 753 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 SPA17Q15506 151 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 TAF5Q15542 800 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 SMAD2Q15796 467 aaKnown RBP18.38■□□□□ 0.53
LINC00271-201ENST00000421378 HECTD3Q5T447 861 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 GPR158Q5T848 1215 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 RAD9BQ6WBX8 426 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 PHLDB2Q86SQ0 1253 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 MAB21L3Q8N8X9 362 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 ZNF653Q96CK0 615 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 CCSER2Q9H7U1 834 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 POPDC2Q9HBU9 364 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.38■□□□□ 0.53
LINC00271-201ENST00000421378 ASNSD1Q9NWL6 643 aa18.38■□□□□ 0.53
LINC00271-201ENST00000421378 EPN1Q9Y6I3 576 aaPredicted RBP18.38■□□□□ 0.53
LINC00271-201ENST00000421378 ZNF263O14978 683 aa18.37■□□□□ 0.53
LINC00271-201ENST00000421378 ATMINO43313 823 aaPredicted RBP18.37■□□□□ 0.53
LINC00271-201ENST00000421378 GRAP2O75791 330 aa18.37■□□□□ 0.53
LINC00271-201ENST00000421378 LCA5LO95447 670 aa18.37■□□□□ 0.53
LINC00271-201ENST00000421378 OAS1P00973 400 aaKnown RBP18.37■□□□□ 0.53
LINC00271-201ENST00000421378 RARGP13631 454 aa18.37■□□□□ 0.53
LINC00271-201ENST00000421378 AAK1Q2M2I8 961 aa18.37■□□□□ 0.53
LINC00271-201ENST00000421378 DNAJC24Q6P3W2 148 aa18.37■□□□□ 0.53
LINC00271-201ENST00000421378 RSRC2Q7L4I2 434 aaKnown RBP18.37■□□□□ 0.53
LINC00271-201ENST00000421378 TADA2BQ86TJ2 420 aa18.37■□□□□ 0.53
LINC00271-201ENST00000421378 EDEM1Q92611 657 aa18.37■□□□□ 0.53
LINC00271-201ENST00000421378 CDK5RAP1Q96SZ6 601 aaKnown RBP18.37■□□□□ 0.53
LINC00271-201ENST00000421378 NACA2Q9H009 215 aa18.37■□□□□ 0.53
LINC00271-201ENST00000421378 TASP1Q9H6P5 420 aa18.37■□□□□ 0.53
LINC00271-201ENST00000421378 GDE1Q9NZC3 331 aa18.37■□□□□ 0.53
LINC00271-201ENST00000421378 CDH7Q9ULB5 785 aa18.37■□□□□ 0.53
LINC00271-201ENST00000421378 ANKRD62A6NC57 917 aa18.36■□□□□ 0.53
LINC00271-201ENST00000421378 SOBPA7XYQ1 873 aa18.36■□□□□ 0.53
LINC00271-201ENST00000421378 EIF3CLB5ME19 914 aaKnown RBP18.36■□□□□ 0.53
LINC00271-201ENST00000421378 CAPN9O14815 690 aa18.36■□□□□ 0.53
LINC00271-201ENST00000421378 CKMP06732 381 aa18.36■□□□□ 0.53
LINC00271-201ENST00000421378 NCAM1P13591 858 aa18.36■□□□□ 0.53
LINC00271-201ENST00000421378 PFKLP17858 780 aa18.36■□□□□ 0.53
LINC00271-201ENST00000421378 GBP2P32456 591 aaPredicted RBP18.36■□□□□ 0.53
LINC00271-201ENST00000421378 GALCP54803 685 aa18.36■□□□□ 0.53
LINC00271-201ENST00000421378 C10orf76Q5T2E6 689 aa18.36■□□□□ 0.53
LINC00271-201ENST00000421378 EIF3CQ99613 913 aaKnown RBP18.36■□□□□ 0.53
LINC00271-201ENST00000421378 SELENOOQ9BVL4 669 aa18.36■□□□□ 0.53
LINC00271-201ENST00000421378 SLC46A2Q9BY10 475 aa18.36■□□□□ 0.53
LINC00271-201ENST00000421378 THAP2Q9H0W7 228 aa18.36■□□□□ 0.53
LINC00271-201ENST00000421378 METTL5Q9NRN9 209 aaKnown RBP18.36■□□□□ 0.53
LINC00271-201ENST00000421378 PARVAQ9NVD7 372 aa18.36■□□□□ 0.53
LINC00271-201ENST00000421378 CNOT8Q9UFF9 292 aaKnown RBP18.36■□□□□ 0.53
LINC00271-201ENST00000421378 TRAV19A0A0A6YYK7 116 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 ARHGAP6O43182 974 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 COCHO43405 550 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 H2AFZP0C0S5 128 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 KRT3P12035 628 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 SP100P23497 879 aaPredicted RBP18.35■□□□□ 0.53
LINC00271-201ENST00000421378 AVPR1AP37288 418 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 RNASE9P60153 205 aaKnown RBP18.35■□□□□ 0.53
LINC00271-201ENST00000421378 C10orf120Q5SQS8 335 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 H2AFVQ71UI9 128 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 BEND5Q7L4P6 421 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 OTOP3Q7RTS5 596 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 CMTM8Q8IZV2 173 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 ZNF276Q8N554 614 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 RNF139Q8WU17 664 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 CTNNBL1Q8WYA6 563 aaPredicted RBP18.35■□□□□ 0.53
LINC00271-201ENST00000421378 PPP1R9BQ96SB3 815 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 PHF7Q9BWX1 381 aaPredicted RBP18.35■□□□□ 0.53
LINC00271-201ENST00000421378 PACSIN1Q9BY11 444 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 LUC7LQ9NQ29 371 aaKnown RBP18.35■□□□□ 0.53
LINC00271-201ENST00000421378 OLA1Q9NTK5 396 aaKnown RBP18.35■□□□□ 0.53
LINC00271-201ENST00000421378 NUDT5Q9UKK9 219 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 USTQ9Y2C2 406 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 ZFP37Q9Y6Q3 630 aaPredicted RBP18.35■□□□□ 0.53
LINC00271-201ENST00000421378 SCINQ9Y6U3 715 aa18.35■□□□□ 0.53
LINC00271-201ENST00000421378 TCRBV5S1A1TA0A578 114 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 DAB1O75553 588 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 OLFM2O95897 454 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 TBX18O95935 607 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 FYNP06241 537 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 IL9P15248 144 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 HDCP19113 662 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 ATP5C1P36542 298 aaKnown RBP18.34■□□□□ 0.53
LINC00271-201ENST00000421378 CCZ1BP86790 482 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 CCZ1P86791 482 aaPredicted RBP18.34■□□□□ 0.53
LINC00271-201ENST00000421378 DCAF6Q58WW2 860 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 PLEKHA7Q6IQ23 1121 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 KLHDC10Q6PID8 442 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 ARCQ7LC44 396 aa18.34■□□□□ 0.53
LINC00271-201ENST00000421378 ARL14EPQ8N8R7 260 aaPredicted RBP18.34■□□□□ 0.53
LINC00271-201ENST00000421378 ZSCAN18Q8TBC5 510 aaPredicted RBP18.34■□□□□ 0.53
LINC00271-201ENST00000421378 KHSRPQ92945 711 aaKnown RBP eCLIP18.34■□□□□ 0.53
LINC00271-201ENST00000421378 ACSF2Q96CM8 615 aaPredicted RBP18.34■□□□□ 0.53
LINC00271-201ENST00000421378 ZSWIM3Q96MP5 696 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms