RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 GDE1Q9NZC3 331 aa17.42■□□□□ 0.38
SUMO1-208ENST00000409627 ZFP37Q9Y6Q3 630 aaPredicted RBP17.42■□□□□ 0.38
SUMO1-208ENST00000409627 TCRBV5S1A1TA0A578 114 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 ANKRD62A6NC57 917 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 C2orf78A6NCI8 922 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 EIF3CLB5ME19 914 aaKnown RBP17.41■□□□□ 0.38
SUMO1-208ENST00000409627 ZNF263O14978 683 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 NDUFA10O95299 355 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 OLFM2O95897 454 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 ABL1P00519 1130 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 RALAP11233 206 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 RARGP13631 454 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 RRM1P23921 792 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 YWHAZP63104 245 aaKnown RBP17.41■□□□□ 0.38
SUMO1-208ENST00000409627 C10orf76Q5T2E6 689 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 HECTD3Q5T447 861 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 STXBP5Q5T5C0 1151 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 TXNDC8Q6A555 127 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 KLHDC10Q6PID8 442 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 RAD9BQ6WBX8 426 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 ARCQ7LC44 396 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 TADA2BQ86TJ2 420 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 DNAAF5Q86Y56 855 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 KHSRPQ92945 711 aaKnown RBP eCLIP17.41■□□□□ 0.383e-6■□□□□ 11.2
SUMO1-208ENST00000409627 FAM149B1Q96BN6 582 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 PPP1R9BQ96SB3 815 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 EIF3CQ99613 913 aaKnown RBP17.41■□□□□ 0.38
SUMO1-208ENST00000409627 PHF7Q9BWX1 381 aaPredicted RBP17.41■□□□□ 0.38
SUMO1-208ENST00000409627 CCSER2Q9H7U1 834 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 OLA1Q9NTK5 396 aaKnown RBP17.41■□□□□ 0.38
SUMO1-208ENST00000409627 CDH7Q9ULB5 785 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 USTQ9Y2C2 406 aa17.41■□□□□ 0.38
SUMO1-208ENST00000409627 EPN1Q9Y6I3 576 aaPredicted RBP17.41■□□□□ 0.38
SUMO1-208ENST00000409627 TRAV19A0A0A6YYK7 116 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 GOLGA8SH3BPF8 625 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 NRDCO43847 1150 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 TLR5O60602 858 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 DAB1O75553 588 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 FYNP06241 537 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 WEE1P30291 646 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 GALCP54803 685 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 MTF1Q14872 753 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 TAF5Q15542 800 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 PLEKHA7Q6IQ23 1121 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 DNAJC24Q6P3W2 148 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 OTOP3Q7RTS5 596 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 MAB21L3Q8N8X9 362 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 ZNF653Q96CK0 615 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 SLC2A13Q96QE2 648 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 MYADMQ96S97 322 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 SLC46A2Q9BY10 475 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 SLITRK6Q9H5Y7 841 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 TRPC7Q9HCX4 862 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 CNOT8Q9UFF9 292 aaKnown RBP17.4■□□□□ 0.38
SUMO1-208ENST00000409627 TMEM59LQ9UK28 342 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 EYSQ5T1H1 3165 aa17.4■□□□□ 0.38
SUMO1-208ENST00000409627 ARHGAP6O43182 974 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 COCHO43405 550 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 IPO7O95373 1038 aaKnown RBP17.39■□□□□ 0.37
SUMO1-208ENST00000409627 PTMAP06454 111 aaKnown RBP17.39■□□□□ 0.37
SUMO1-208ENST00000409627 H2AFZP0C0S5 128 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 ABCB4P21439 1286 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 GBP2P32456 591 aaPredicted RBP17.39■□□□□ 0.37
SUMO1-208ENST00000409627 CCZ1BP86790 482 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 CCZ1P86791 482 aaPredicted RBP17.39■□□□□ 0.37
SUMO1-208ENST00000409627 SPA17Q15506 151 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 PPP1R15BQ5SWA1 713 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 MSANTD2Q6P1R3 559 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 POTEHQ6S545 545 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 H2AFVQ71UI9 128 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 RSRC2Q7L4I2 434 aaKnown RBP17.39■□□□□ 0.37
SUMO1-208ENST00000409627 CMTM8Q8IZV2 173 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 ATXN2LQ8WWM7 1075 aaKnown RBP17.39■□□□□ 0.37
SUMO1-208ENST00000409627 EDEM1Q92611 657 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 SELENOOQ9BVL4 669 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 THAP2Q9H0W7 228 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 LUC7LQ9NQ29 371 aaKnown RBP17.39■□□□□ 0.37
SUMO1-208ENST00000409627 METTL5Q9NRN9 209 aaKnown RBP17.39■□□□□ 0.37
SUMO1-208ENST00000409627 PARVAQ9NVD7 372 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 INTUQ9ULD6 942 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 SCINQ9Y6U3 715 aa17.39■□□□□ 0.37
SUMO1-208ENST00000409627 SIGLEC16A6NMB1 481 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 CAPN9O14815 690 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 ATMINO43313 823 aaPredicted RBP17.38■□□□□ 0.37
SUMO1-208ENST00000409627 GRAP2O75791 330 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 CKMP06732 381 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 TMEM253P0C7T8 217 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 KRT3P12035 628 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 LAMP2P13473 410 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 NCAM1P13591 858 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 IL9P15248 144 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 HDCP19113 662 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 ATP5C1P36542 298 aaKnown RBP17.38■□□□□ 0.37
SUMO1-208ENST00000409627 AVPR1AP37288 418 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 GPC5P78333 572 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 SLC7A9P82251 487 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 MAMLD1Q13495 774 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 C10orf120Q5SQS8 335 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 PHLDB2Q86SQ0 1253 aa17.38■□□□□ 0.37
SUMO1-208ENST00000409627 DEFB106AQ8N104 65 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms