RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 HMBOX1Q6NT76 420 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 PACS2Q86VP3 889 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 OR5J2Q8NH18 312 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 UTP15Q8TED0 518 aaKnown RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 TRABDQ9H4I3 376 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 CORO2BQ9UQ03 480 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 MPDZO75970 2070 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 IQCMA0A1B0GVH7 501 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 MAGEB16A2A368 324 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 MED24O75448 989 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 ACTR2P61160 394 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 TRAF2Q12933 501 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 PUM1Q14671 1186 aaKnown RBP eCLIP8.83□□□□□ -1
CACNA1C-220ENST00000399655 KYNUQ16719 465 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 FAM26FQ5R3K3 315 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 ZNF589Q86UQ0 364 aaPredicted RBP8.83□□□□□ -1
CACNA1C-220ENST00000399655 ATCAYQ86WG3 371 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 ATL2Q8NHH9 583 aa8.83□□□□□ -1
CACNA1C-220ENST00000399655 PHF20L1A8MW92 1017 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 CHURC1-FNTBB4DL54 471 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 SLCO1B7G3V0H7 640 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 CYB5AP00167 134 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ATP5BP06576 529 aaKnown RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 GPTP24298 496 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ITGA9Q13797 1035 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 FAM83EQ2M2I3 478 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 GPR158Q5T848 1215 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 C7orf31Q8N865 590 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 KCTD4Q8WVF5 259 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 CHORDC1Q9UHD1 332 aaPredicted RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 H3BN98 237 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 SCAMP1O15126 338 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 IFNA2P01563 188 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ARHGAP15Q53QZ3 475 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 Q8N402 240 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 AFG1LQ8WV93 481 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 TGM6O95932 706 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 PRLRP16471 622 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 POU1F1P28069 291 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 NOS2P35228 1153 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ENPEPQ07075 957 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 SCGB3A2Q96PL1 93 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 EHD4Q9H223 541 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 NELFAQ9H3P2 528 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 DDX18Q9NVP1 670 aaKnown RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 ARL15Q9NXU5 204 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 HEY1Q9Y5J3 304 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 HLA-DQA1Q5Y7H0 255 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 LMBR1LQ6UX01 489 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ATG14Q6ZNE5 492 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 OR14K1Q8NGZ2 314 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 APBB2Q92870 758 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 REPS1Q96D71 796 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 KLHL5Q96PQ7 755 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 TMEM63CQ9P1W3 806 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 PADI4Q9UM07 663 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 KANTRA0A1W2PQU2 76 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 CLK3P49761 638 aaKnown RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 BTBD8Q5XKL5 378 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ZNF567Q8N184 647 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 LNPEPQ9UIQ6 1025 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 PRRC2BQ5JSZ5 2229 aaKnown RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 ANXA1P04083 346 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 KCNB1Q14721 858 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 FBXW10Q5XX13 1052 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ATG9AQ7Z3C6 839 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 LPIN2Q92539 896 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 CNPPD1Q9BV87 410 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 SPRP35270 261 aaPredicted RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 ITIH4Q14624 930 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ZCCHC12Q6PEW1 402 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 SMARCD3Q6STE5 483 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 OR51D1Q8NGF3 324 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 OR52K2Q8NGK3 314 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 HASPINQ8TF76 798 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 KCNN2Q9H2S1 579 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 ZNF221Q9UK13 617 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 LRCH1Q9Y2L9 728 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 CABIN1Q9Y6J0 2220 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 INO80B-WBP1J3KQ70 363 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 EGFRP00533 1210 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 FAM153BP0C7A2 387 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ATP6V1B2P21281 511 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 RPA1P27694 616 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 ZNF234Q14588 700 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 PTPN21Q16825 1174 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.82□□□□□ -1
CACNA1C-220ENST00000399655 IZUMO2Q6UXV1 221 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 DENND5BQ6ZUT9 1274 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 TIGD4Q8IY51 512 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 SPATA5Q8NB90 893 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 MXD3Q9BW11 206 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 WDR11Q9BZH6 1224 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 INO80BQ9C086 356 aaPredicted RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 TAF1DQ9H5J8 278 aaPredicted RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 SPATA7Q9P0W8 599 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 LSM7Q9UK45 103 aaKnown RBP8.82□□□□□ -1
CACNA1C-220ENST00000399655 METTL18O95568 372 aa8.82□□□□□ -1
CACNA1C-220ENST00000399655 THRAP10827 490 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms