RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 BCAT1P54687 386 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 YWHAGP61981 247 aaKnown RBP eCLIP16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 SLC10A2Q12908 348 aaPredicted RBP16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 WSCD1Q658N2 575 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 ARHGEF18Q6ZSZ5 1173 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 FAM228AQ86W67 206 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 UNC93AQ86WB7 457 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 ATP11CQ8NB49 1132 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 WNT8BQ93098 351 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 CFAP36Q96G28 342 aa16.63■□□□□ 0.25
CNKSR1-202ENST00000374253 CCT8L1PA6NM43 557 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 KBTBD13C9JR72 458 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 DPYSL4O14531 572 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 FSBPO95073 299 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 CD4P01730 458 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 APRTP07741 180 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 SCTRP47872 440 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 GEMIN4P57678 1058 aaKnown RBP16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 RNASELQ05823 741 aaKnown RBP16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 DNAJC3Q13217 504 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 SLC1A5Q15758 541 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 FAM47CQ5HY64 1035 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 ARHGAP17Q68EM7 881 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 CXCL17Q6UXB2 119 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 PIGZQ86VD9 579 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 SMC6Q96SB8 1091 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 FRMD8P1Q9BZ68 369 aaPredicted RBP16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 NSRP1Q9H0G5 558 aaKnown RBP16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 NMRK2Q9NPI5 230 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 PSMC3IPQ9P2W1 217 aaPredicted RBP16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 AP4E1Q9UPM8 1137 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 RALGAPA2Q2PPJ7 1873 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 WDR91A4D1P6 747 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 PGK1P00558 417 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 CTGFP29279 349 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 L1CAMP32004 1257 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 CDC42EP1Q00587 391 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 PDK2Q15119 407 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 CGB2Q6NT52 195 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 B3GALNT2Q8NCR0 500 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 ZNF560Q96MR9 790 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 KCTD15Q96SI1 283 aaPredicted RBP16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 NRDE2Q9H7Z3 1164 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 SLCO1B3Q9NPD5 702 aa16.62■□□□□ 0.25
CNKSR1-202ENST00000374253 TNPO2O14787 897 aaKnown RBP16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 SETSIPP0DME0 302 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 GOT1P17174 413 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 TAC1P20366 129 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 AMPD1P23109 780 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 STIP1P31948 543 aaKnown RBP16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 MLH1P40692 756 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 PURAQ00577 322 aaKnown RBP16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 KCNJ11Q14654 390 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 DCAF6Q58WW2 860 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 EFHC2Q5JST6 749 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 FUKQ8N0W3 1084 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 DEFB106AQ8N104 65 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 CEP41Q9BYV8 373 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 CYB561D2O14569 222 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 FAM155BO75949 473 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 RDXP35241 583 aaKnown RBP16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 CRYBB1P53674 252 aaPredicted RBP16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 GNASQ5JWF2 1037 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 KIAA0319Q5VV43 1072 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 RASAL3Q86YV0 1011 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 CRYBG2Q8N1P7 616 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 RIBC1Q8N443 379 aaPredicted RBP16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 ADAM32Q8TC27 787 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 ALG13Q9NP73 1137 aaKnown RBP16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 HAUS2Q9NVX0 235 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 PIH1D1Q9NWS0 290 aaKnown RBP16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 MTMR10Q9NXD2 777 aa16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 ZMYND8Q9ULU4 1186 aaPredicted RBP16.61■□□□□ 0.25
CNKSR1-202ENST00000374253 PHBP35232 272 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 SMAD1Q15797 465 aaKnown RBP16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 KBTBD12Q3ZCT8 623 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 PAN2Q504Q3 1202 aaKnown RBP16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 MDH1BQ5I0G3 518 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 SLC9A4Q6AI14 798 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 SLC26A9Q7LBE3 791 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 PRPF39Q86UA1 669 aaKnown RBP16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 RNF169Q8NCN4 708 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 TRPV1Q8NER1 839 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 GAD1Q99259 594 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 MED10Q9BTT4 135 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 ETNK1Q9HBU6 452 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 USP15Q9Y4E8 981 aaPredicted RBP16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 TCRBV9S1A1TA0A576 114 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 E7ESA3 106 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 METTL18O95568 372 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 ASMTLO95671 621 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 CPP00450 1065 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 KCNE1P15382 129 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 AXLP30530 894 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 MSH2P43246 934 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 SULT1E1P49888 294 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 MAP3K7CLP57077 242 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 NME3Q13232 169 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 SV2CQ496J9 727 aa16.6■□□□□ 0.25
CNKSR1-202ENST00000374253 HFE2Q6ZVN8 426 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms