RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 GRIA1P42261 906 aa24.77■■□□□ 1.56
CDK9-201ENST00000373264 ZBTB6Q15916 424 aa24.77■■□□□ 1.56
CDK9-201ENST00000373264 DUSP28Q4G0W2 176 aa24.77■■□□□ 1.56
CDK9-201ENST00000373264 FAM47CQ5HY64 1035 aa24.77■■□□□ 1.56
CDK9-201ENST00000373264 CAND1Q86VP6 1230 aaKnown RBP24.77■■□□□ 1.56
CDK9-201ENST00000373264 ETNK1Q9HBU6 452 aa24.77■■□□□ 1.56
CDK9-201ENST00000373264 TARSP26639 723 aaKnown RBP24.77■■□□□ 1.56
CDK9-201ENST00000373264 SLC18A1P54219 525 aa24.77■■□□□ 1.56
CDK9-201ENST00000373264 RASA2Q15283 850 aa24.77■■□□□ 1.56
CDK9-201ENST00000373264 ASRGL1Q7L266 308 aa24.77■■□□□ 1.56
CDK9-201ENST00000373264 CCDC185Q8N715 623 aa24.77■■□□□ 1.56
CDK9-201ENST00000373264 KBTBD7Q8WVZ9 684 aa24.77■■□□□ 1.56
CDK9-201ENST00000373264 DHX35Q9H5Z1 703 aaKnown RBP24.77■■□□□ 1.56
CDK9-201ENST00000373264 ETNK2Q9NVF9 386 aa24.77■■□□□ 1.56
CDK9-201ENST00000373264 L3MBTL1Q9Y468 752 aa24.77■■□□□ 1.56
CDK9-201ENST00000373264 DYNC1LI2O43237 492 aaPredicted RBP24.76■■□□□ 1.55
CDK9-201ENST00000373264 METTL18O95568 372 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 ZBED1O96006 694 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 C1QAP02745 245 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 CYP2F1P24903 491 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 ACVR2BQ13705 512 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 C9orf57Q5W0N0 161 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 SLC27A1Q6PCB7 646 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 CYTH2Q99418 400 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 CACNG4Q9UBN1 327 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 DCTN4Q9UJW0 460 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 KIAA1257Q9ULG3 409 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 TRIP12Q14669 1992 aaPredicted RBP24.76■■□□□ 1.55
CDK9-201ENST00000373264 RABGGTBP53611 331 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 SOX4Q06945 474 aaPredicted RBP24.76■■□□□ 1.55
CDK9-201ENST00000373264 BOLA3Q53S33 107 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 SWT1Q5T5J6 900 aaKnown RBP24.76■■□□□ 1.55
CDK9-201ENST00000373264 SLC9A4Q6AI14 798 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 MPP5Q8N3R9 675 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 C10orf82Q8WW14 230 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 SMYD2Q9NRG4 433 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 HESX1Q9UBX0 185 aa24.76■■□□□ 1.55
CDK9-201ENST00000373264 DOCK3Q8IZD9 2030 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 MYO18AQ92614 2054 aaKnown RBP24.75■■□□□ 1.55
CDK9-201ENST00000373264 LOC102724159A0A0B4J2E5 919 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 DPYSL4O14531 572 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 PYGBP11216 843 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 PWP2Q15269 919 aaKnown RBP24.75■■□□□ 1.55
CDK9-201ENST00000373264 DGKDQ16760 1214 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 KYAT1Q16773 422 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 RGS9BPQ6ZS82 235 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 MAP7D3Q8IWC1 876 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 CTAGE3PQ8IX95 158 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 RFWD2Q8NHY2 731 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 GRAMD1AQ96CP6 724 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 NRDE2Q9H7Z3 1164 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.75■■□□□ 1.55
CDK9-201ENST00000373264 NDC80O14777 642 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 L1CAMP32004 1257 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 PITX1P78337 314 aaPredicted RBP24.75■■□□□ 1.55
CDK9-201ENST00000373264 CDHR3Q6ZTQ4 885 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 ZNF410Q86VK4 478 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 LRRC6Q86X45 466 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 PPM1NQ8N819 430 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 FAM111AQ96PZ2 611 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 ARHGEF3Q9NR81 526 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 PIH1D1Q9NWS0 290 aaKnown RBP24.75■■□□□ 1.55
CDK9-201ENST00000373264 MTMR10Q9NXD2 777 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 KANSL3Q9P2N6 904 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 HAO1Q9UJM8 370 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 TTLL3Q9Y4R7 772 aa24.75■■□□□ 1.55
CDK9-201ENST00000373264 CFAP73A6NFT4 308 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 ZWINTO95229 277 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 MT-ND3P03897 115 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 SMIM10L2AP0DMW4 78 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 SMIM10L2BP0DMW5 78 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 PDK2Q15119 407 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 SMAD1Q15797 465 aaKnown RBP24.74■■□□□ 1.55
CDK9-201ENST00000373264 DNAJB3Q8WWF6 145 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 SLC44A1Q8WWI5 657 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 UTP4Q969X6 686 aaKnown RBP24.74■■□□□ 1.55
CDK9-201ENST00000373264 TINF2Q9BSI4 451 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 PHACTR1Q9C0D0 580 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 SLC5A4Q9NY91 659 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 CHADO15335 359 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 TKTP29401 623 aaKnown RBP24.74■■□□□ 1.55
CDK9-201ENST00000373264 GBP2P32456 591 aaPredicted RBP24.74■■□□□ 1.55
CDK9-201ENST00000373264 RDXP35241 583 aaKnown RBP24.74■■□□□ 1.55
CDK9-201ENST00000373264 DCAF4L1Q3SXM0 396 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 DPY19L2Q6NUT2 758 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 ZNF449Q6P9G9 518 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 GBP7Q8N8V2 638 aaPredicted RBP24.74■■□□□ 1.55
CDK9-201ENST00000373264 SLC2A14Q8TDB8 520 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 TRIM6Q9C030 488 aaPredicted RBP24.74■■□□□ 1.55
CDK9-201ENST00000373264 POPDC2Q9HBU9 364 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 FETUBQ9UGM5 382 aa24.74■■□□□ 1.55
CDK9-201ENST00000373264 ZNF638Q14966 1978 aaKnown RBP24.74■■□□□ 1.55
CDK9-201ENST00000373264 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.73■■□□□ 1.55
CDK9-201ENST00000373264 CBX6O95503 412 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 BMPR2Q13873 1038 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 SEPT7Q16181 437 aaKnown RBP24.73■■□□□ 1.55
CDK9-201ENST00000373264 SH2D5Q6ZV89 423 aa24.73■■□□□ 1.55
CDK9-201ENST00000373264 ZC3H15Q8WU90 426 aaKnown RBP24.73■■□□□ 1.55
CDK9-201ENST00000373264 KCTD15Q96SI1 283 aaPredicted RBP24.73■■□□□ 1.55
CDK9-201ENST00000373264 GCOM2Q9BZD3 368 aaPredicted RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms