RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ARHGAP1Q07960 439 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 CDCA2Q69YH5 1023 aaPredicted RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 TIGD7Q6NT04 549 aaPredicted RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 B3GNT9Q6UX72 402 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 CXCL17Q6UXB2 119 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 RYBPQ8N488 228 aaPredicted RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 TSEN2Q8NCE0 465 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 CALML6Q8TD86 181 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 L3MBTL3Q96JM7 780 aaPredicted RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 AGAP3Q96P47 875 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 GAD1Q99259 594 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC13A1Q9BZW2 595 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 FBXO44Q9H4M3 255 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 POPDC2Q9HBU9 364 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 GPATCH2LQ9NWQ4 482 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 ZFP69BQ9UJL9 534 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 AAR2Q9Y312 384 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 USH1CQ9Y6N9 552 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 RREB1Q92766 1687 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SRRM3A6NNA2 597 aaPredicted RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 DCDC2CA8MYV0 355 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 GPR25O00155 361 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 LIASO43766 372 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 CCDC22O60826 627 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 OPHN1O60890 802 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 HAUS5O94927 633 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 CST3P01034 146 aaPredicted RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 NPR3P17342 541 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SMPD1P17405 629 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 CHRNB2P17787 502 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 EDNRBP24530 442 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 YY1P25490 414 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 ALDH7A1P49419 539 aaKnown RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 RCN2Q14257 317 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 ZBTB41Q5SVQ8 909 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 C4orf33Q8N1A6 199 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 C1orf127Q8N9H9 656 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 CFAP61Q8NHU2 1237 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 BRI3BPQ8WY22 251 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 ART4Q93070 314 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 LRRC39Q96DD0 335 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SPDL1Q96EA4 605 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SEC16BQ96JE7 1060 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 ZNF512Q96ME7 567 aaPredicted RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SEPT5Q99719 369 aaPredicted RBP5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 SPON2Q9BUD6 331 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 WWP1Q9H0M0 922 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 BCAS3Q9H6U6 928 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 CDH9Q9ULB4 789 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 GRID1Q9ULK0 1009 aa5.51□□□□□ -1.53
SMNDC1-202ENST00000369603 PEX10O60683 326 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 SMIM24O75264 130 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 GJB6O95452 261 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 NUDT17P0C025 328 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 TSHRP16473 764 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CYP3A5P20815 502 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CYP2C18P33260 490 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 KPNA1P52294 538 aaPredicted RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 GEMP55040 296 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 RPL7AP62424 266 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 SP3Q02447 781 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CTXN3Q4LDR2 81 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 PALB2Q86YC2 1186 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 DEFB106AQ8N104 65 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 LZTR1Q8N653 840 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 B3GALNT2Q8NCR0 500 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 HDAC11Q96DB2 347 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 HMX1Q9NP08 348 aaPredicted RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 PPARGC1AQ9UBK2 798 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 MORF4L1Q9UBU8 362 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 LSM7Q9UK45 103 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 COG5Q9UP83 839 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 TRIM33Q9UPN9 1127 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 Q9Y3F1 56 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 PTCH2Q9Y6C5 1203 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ADGRA3Q8IWK6 1321 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 hCG_1818297A0A087WSY0 165 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CARNS1A5YM72 827 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CCDC160A6NGH7 325 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 F5H423 210 aaPredicted RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 O00370 1275 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 TRUB2O95900 331 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CALCAP01258 141 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ALDH2P05091 517 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 MYBL2P10244 700 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 UNGP13051 313 aaPredicted RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 PECAM1P16284 738 aaPredicted RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ACAT1P24752 427 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 DNAJB2P25686 324 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CCR1P32246 355 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 HARS2P49590 506 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CDK16Q00536 496 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 TARBP2Q15633 366 aaKnown RBP5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 C10orf120Q5SQS8 335 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 C9orf57Q5W0N0 161 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 CYB5D1Q6P9G0 228 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 FAM183BPQ6ZVS7 135 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC26A11Q86WA9 606 aa5.5□□□□□ -1.53
SMNDC1-202ENST00000369603 ALLCQ8N6M5 410 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms