RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 N4BP2L1Q5TBK1 243 aaPredicted RBP13.11□□□□□ -0.31
SGCA-202ENST00000344627 KRT39Q6A163 491 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 ISM2Q6H9L7 571 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 LPCAT2Q7L5N7 544 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 OLIG1Q8TAK6 271 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 EZH1Q92800 747 aaPredicted RBP13.11□□□□□ -0.31
SGCA-202ENST00000344627 HEXIM2Q96MH2 286 aaKnown RBP13.11□□□□□ -0.31
SGCA-202ENST00000344627 TWNKQ96RR1 684 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 TMEM9BQ9NQ34 198 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 IL37Q9NZH6 218 aa13.11□□□□□ -0.31
SGCA-202ENST00000344627 MYO18AQ92614 2054 aaKnown RBP13.11□□□□□ -0.31
SGCA-202ENST00000344627 FAM92AA1XBS5 289 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 HOXC11O43248 304 aaPredicted RBP13.1□□□□□ -0.31
SGCA-202ENST00000344627 TLR5O60602 858 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 KAT7O95251 611 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 ADH5P11766 374 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 ACO1P21399 889 aaKnown RBP13.1□□□□□ -0.31
SGCA-202ENST00000344627 SLC6A11P48066 632 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 ENPEPQ07075 957 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 GOLGA8FQ08AF8 430 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 GOLGA8DPQ0D2H9 430 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 ZCWPW2Q504Y3 356 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 ZNF658Q5TYW1 1059 aaPredicted RBP13.1□□□□□ -0.31
SGCA-202ENST00000344627 SLC36A4Q6YBV0 504 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 CYP2U1Q7Z449 544 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 CCDC33Q8N5R6 958 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 ZMIZ2Q8NF64 920 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 CEP76Q8TAP6 659 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 SEMA4DQ92854 862 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 GSDMAQ96QA5 445 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 HNRNPABQ99729 332 aaKnown RBP13.1□□□□□ -0.31
SGCA-202ENST00000344627 NUSAP1Q9BXS6 441 aaKnown RBP13.1□□□□□ -0.31
SGCA-202ENST00000344627 RAB20Q9NX57 234 aa13.1□□□□□ -0.31
SGCA-202ENST00000344627 TMEM8BA6NDV4 472 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 CILPO75339 1184 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 P2RY2P41231 377 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 KDSRQ06136 332 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 INCA1Q0VD86 236 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 STIM1Q13586 685 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 ANO4Q32M45 955 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 ANKRD40Q6AI12 368 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 ANO7Q6IWH7 933 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 RHBDF2Q6PJF5 856 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 CLEC20AQ6ZU45 233 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 NAT16Q8N8M0 369 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 FBXL13Q8NEE6 735 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 SLC32A1Q9H598 525 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 CSNK1G1Q9HCP0 422 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 ARHGEF4Q9NR80 690 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 DEC1Q9P2X7 70 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 SCML2Q9UQR0 700 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 STARD13Q9Y3M8 1113 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 PCDHA5Q9Y5H7 936 aa13.09□□□□□ -0.31
SGCA-202ENST00000344627 LNP1A1A4G5 178 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 UPK3BL1B0FP48 263 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 UPK3BL2E5RIL1 263 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 CYP26A1O43174 497 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 MAP3K13O43283 966 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 ZNF217O75362 1048 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 TBX18O95935 607 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 ZDHHC11BP0C7U3 371 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 RDXP35241 583 aaKnown RBP13.08□□□□□ -0.32
SGCA-202ENST00000344627 TIE1P35590 1138 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 ATP5C1P36542 298 aaKnown RBP13.08□□□□□ -0.32
SGCA-202ENST00000344627 KIR2DL1P43626 348 aaPredicted RBP13.08□□□□□ -0.32
SGCA-202ENST00000344627 PGFP49763 221 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 ZNF132P52740 706 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 FKBP3Q00688 224 aaKnown RBP13.08□□□□□ -0.32
SGCA-202ENST00000344627 HNRNPDQ14103 355 aaKnown RBP13.08□□□□□ -0.32
SGCA-202ENST00000344627 GAB4Q2WGN9 574 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 C10orf120Q5SQS8 335 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 LY6G5CQ5SRR4 150 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
SGCA-202ENST00000344627 SDE2Q6IQ49 451 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 GPRIN1Q7Z2K8 1008 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 TADA2BQ86TJ2 420 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 SYT12Q8IV01 421 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 BBS7Q8IWZ6 715 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 IL17RCQ8NAC3 791 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 MDGA1Q8NFP4 955 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 TATDN2Q93075 761 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 FAXDC2Q96IV6 333 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 XPO6Q96QU8 1125 aaKnown RBP13.08□□□□□ -0.32
SGCA-202ENST00000344627 GTPBP4Q9BZE4 634 aaKnown RBP13.08□□□□□ -0.32
SGCA-202ENST00000344627 PNPLA8Q9NP80 782 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 CISHQ9NSE2 258 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 WDR35Q9P2L0 1181 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 LSM7Q9UK45 103 aaKnown RBP13.08□□□□□ -0.32
SGCA-202ENST00000344627 NUDT5Q9UKK9 219 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 CIZ1Q9ULV3 898 aaPredicted RBP13.08□□□□□ -0.32
SGCA-202ENST00000344627 INVSQ9Y283 1065 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 EML5Q05BV3 1969 aa13.08□□□□□ -0.32
SGCA-202ENST00000344627 KIAA1549LQ6ZVL6 1849 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 A0A1W2PQH9 124 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 TRIM49BA6NDI0 452 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 TBC1D3BA6NDS4 549 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 C4orf47A7E2U8 309 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 PSMA7O14818 248 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 NPC1O15118 1278 aa13.07□□□□□ -0.32
SGCA-202ENST00000344627 MDM4O15151 490 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms