RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 GTSE1Q9NYZ3 720 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 TLK1Q9UKI8 766 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 SLC39A10Q9ULF5 831 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 KLRG2A4D1S0 409 aaPredicted RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 CFAP73A6NFT4 308 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 NDC80O14777 642 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 PPEF2O14830 753 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 BUD23O43709 281 aaKnown RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 DRG2P55039 364 aaKnown RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 MYBPC2Q14324 1141 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 CA9Q16790 459 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 CCDC14Q49A88 953 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 FASTKD1Q53R41 847 aaKnown RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 VWA5B1Q5TIE3 1220 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 TMEM154Q6P9G4 183 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 CMC1Q7Z7K0 106 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 WDR49Q8IV35 697 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 LRRC43Q8N309 656 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 GALNT4Q8N4A0 578 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 ZCCHC9Q8N567 271 aaKnown RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 C1orf127Q8N9H9 656 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 OR6J1Q8NGC5 347 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 CPT1BQ92523 772 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 OPTNQ96CV9 577 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 CDCA5Q96FF9 252 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 FAM167AQ96KS9 214 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 ACO2Q99798 780 aaKnown RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 MRIQ9BWK5 157 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 EPB41L4BQ9H329 900 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 RSAD1Q9HA92 442 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 IL1RL2Q9HB29 575 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 CCDC88AQ3V6T2 1871 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 CASTOR2A6NHX0 329 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 SPECC1L-ADORA2AF8WAN1 911 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 KRT36O76013 467 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 SNRPAP09012 282 aaKnown RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 CYP2C9P11712 490 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 ARF4P18085 180 aaPredicted RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 CYP2F1P24903 491 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 SLC25A3Q00325 362 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 ITGA9Q13797 1035 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 MORF4L2Q15014 288 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 RASA2Q15283 850 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 SH2D4BQ5SQS7 431 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 CRELD2Q6UXH1 353 aaPredicted RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 PTAR1Q7Z6K3 402 aaPredicted RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 KATNAL2Q8IYT4 538 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 SNX31Q8N9S9 440 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 REPS2Q8NFH8 660 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 IPMKQ8NFU5 416 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 SREK1Q8WXA9 508 aaKnown RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 AZIN2Q96A70 460 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 KLRG1Q96E93 195 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 TMA16Q96EY4 203 aaKnown RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 C2orf40Q9H1Z8 148 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 ADAM7Q9H2U9 754 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 ZNF358Q9NW07 568 aa8.53□□□□□ -1.04
HPS4-201ENST00000336873 ZMYND8Q9ULU4 1186 aaPredicted RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 SMG5Q9UPR3 1016 aaKnown RBP8.53□□□□□ -1.04
HPS4-201ENST00000336873 SPATA31C2B4DYI2 1134 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 GOT1P17174 413 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 TSPAN8P19075 237 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 MGAT1P26572 445 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 SERPINB4P48594 390 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 CXCR3P49682 368 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 ADIGQ0VDE8 80 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 UBAP2LQ14157 1087 aaKnown RBP8.52□□□□□ -1.04
HPS4-201ENST00000336873 MTFR1Q15390 333 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 HSP90AA5PQ58FG0 334 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 PPM1JQ5JR12 505 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 PMF1Q6P1K2 205 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 RASSF3Q86WH2 238 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 ARHGAP24Q8N264 748 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 ALLCQ8N6M5 410 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 C3orf20Q8ND61 904 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 ELOVL4Q9GZR5 314 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 TXNRD2Q9NNW7 524 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 DDIT4Q9NX09 232 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 AP4E1Q9UPM8 1137 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 DNAJC16Q9Y2G8 782 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 V9GYQ6 96 aa8.52□□□□□ -1.04
HPS4-201ENST00000336873 SOWAHBA6NEL2 793 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 NFKBIEO00221 500 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 TPST1O60507 370 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 USP1O94782 785 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 TFE3P19532 575 aaPredicted RBP8.52□□□□□ -1.05
HPS4-201ENST00000336873 ETFBP38117 255 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 IRX1P78414 480 aaPredicted RBP8.52□□□□□ -1.05
HPS4-201ENST00000336873 ITIH4Q14624 930 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 SURF1Q15526 300 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 PDCD2Q16342 344 aaPredicted RBP8.52□□□□□ -1.05
HPS4-201ENST00000336873 DPY19L2P1Q6NXN4 242 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 RFWD3Q6PCD5 774 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 FAM228AQ86W67 206 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 IFNEQ86WN2 208 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 SPNS2Q8IVW8 549 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 PYDC1Q8WXC3 89 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 USP13Q92995 863 aaPredicted RBP8.52□□□□□ -1.05
HPS4-201ENST00000336873 ZFP42Q96MM3 310 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 MRPL45Q9BRJ2 306 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms