RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ILF2Q12905 390 aaKnown RBP17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 MTM1Q13496 603 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 STRA8Q7Z7C7 330 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 PIK3CDO00329 1044 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 PDGFRBP09619 1106 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 EXOSC10Q01780 885 aaKnown RBP17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 ITGA9Q13797 1035 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 RGS21Q2M5E4 152 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 ATAD3BQ5T9A4 648 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 ZCCHC8Q6NZY4 707 aaKnown RBP17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 OOSP2Q86WS3 158 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 UXS1Q8NBZ7 420 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 HPDLQ96IR7 371 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 MLPHQ9BV36 600 aaPredicted RBP17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 OSBPL6Q9BZF3 934 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 TEX28O15482 410 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 ECDO95905 644 aaPredicted RBP17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 H2AFXP16104 143 aaPredicted RBP17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 EMC2Q15006 297 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 NEDD8Q15843 81 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 ROGDIQ9GZN7 287 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 PADI4Q9UM07 663 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 MINPP1Q9UNW1 487 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 DRG1Q9Y295 367 aaKnown RBP17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 ANXA6P08133 673 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 PRDX5P30044 214 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 MAD2L1Q13257 205 aaPredicted RBP17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 TCHHL1Q5QJ38 904 aaPredicted RBP17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 IZUMO1Q8IYV9 350 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 ATG7O95352 703 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 MPOP05164 745 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 CACNB3P54284 484 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 A0A087WXM4 84 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 MYL12BO14950 172 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 ECE2O60344 883 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 ATP6V1C1P21283 382 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 GRK3P35626 688 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 SRBD1Q8N5C6 995 aaKnown RBP17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 UTP15Q8TED0 518 aaKnown RBP17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 SH3BP1Q9Y3L3 701 aa17.37■□□□□ 0.37
SMCHD1-201ENST00000320876 GSG1L2A8MUP6 293 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 MAGEB2O15479 319 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 ERAP2Q6P179 960 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 UGT2B28Q9BY64 529 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 ZNF624Q9P2J8 865 aaPredicted RBP17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.36■□□□□ 0.371e-6■■■□□ 18.1
SMCHD1-201ENST00000320876 NCF1BA6NI72 391 aaPredicted RBP17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 NCF1CA8MVU1 366 aaPredicted RBP17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 NCF1P14598 390 aaPredicted RBP17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 GPC1P35052 558 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 SLC1A6P48664 564 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 XRCC4Q13426 336 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 SCUBE2Q9NQ36 999 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 ZCCHC11Q5TAX3 1644 aaKnown RBP17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 VPS4BO75351 444 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 KLRC1P26715 233 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 CAMK2GQ13555 558 aaPredicted RBP17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 MIEF1Q9NQG6 463 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 SH3BP4Q9P0V3 963 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 GTF3C4Q9UKN8 822 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 CCDC182A6NF36 153 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 CLTBP09497 229 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 GTF2H1P32780 548 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 STAT5AP42229 794 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 DGKDQ16760 1214 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 TTLL6Q8N841 843 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 THAP1Q9NVV9 213 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 DUSP12Q9UNI6 340 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 UBDO15205 165 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 ETFBP38117 255 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 KATNAL1Q9BW62 490 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 GMEB1Q9Y692 573 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 MYMKA6NI61 221 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 CD3EAPO15446 510 aaKnown RBP17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 EPB42P16452 691 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 MZT2BQ6NZ67 158 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 KATNA1O75449 491 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 PABPC1P11940 636 aaKnown RBP17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 NME5P56597 212 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 POLD3Q15054 466 aaPredicted RBP17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 ANKRD6Q9Y2G4 727 aa17.36■□□□□ 0.37
SMCHD1-201ENST00000320876 PRRG1O14668 218 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 VCLP18206 1134 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 YWHAZP63104 245 aaKnown RBP17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 BLOC1S5Q8TDH9 187 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 SLITRK2Q9H156 845 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 KLHL1Q9NR64 748 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 PDGFCQ9NRA1 345 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 IARS2Q9NSE4 1012 aaKnown RBP17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 PMPCBO75439 489 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 HLA-DRAP01903 254 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 DHFR2Q86XF0 187 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 MYO1HQ8N1T3 1032 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 NMRK2Q9NPI5 230 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 DNAJC16Q9Y2G8 782 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 CITO14578 2027 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 RAG1P15918 1043 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 PNPLA4P41247 253 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 CCDC33Q8N5R6 958 aa17.35■□□□□ 0.37
SMCHD1-201ENST00000320876 TMEM143Q96AN5 459 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms