RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 FAM171A1Q5VUB5 890 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 ACAD10Q6JQN1 1059 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 IRF2BP2Q7Z5L9 587 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 FAM35AQ86V20 835 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 ZNF280BQ86YH2 543 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 SUGP1Q8IWZ8 645 aaKnown RBP3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 CNPY4Q8N129 248 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 KLHL23Q8NBE8 558 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 STKLD1Q8NE28 680 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 ELOA3Q8NG57 546 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 DDX1Q92499 740 aaKnown RBP3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 GCNAQ96QF7 691 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 PPP1R16BQ96T49 567 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 AGPAT1Q99943 283 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 DDX50Q9BQ39 737 aaKnown RBP3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 DCLK3Q9C098 648 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 MMRN2Q9H8L6 949 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 USTQ9Y2C2 406 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 INPP5FQ9Y2H2 1132 aa3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 HBS1LQ9Y450 684 aaKnown RBP3.47□□□□□ -1.85
SCAMP1-201ENST00000320280 NYNRINQ9P2P1 1898 aaKnown RBP3.46□□□□□ -1.85
SCAMP1-201ENST00000320280 C2orf16Q68DN1 1984 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 KIAA0100Q14667 2235 aaKnown RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 MTMR11A4FU01 709 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 ANKRD62A6NC57 917 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 CASTOR2A6NHX0 329 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 HSF2BPO75031 334 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 CLASP2O75122 1294 aaKnown RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 ADCY5O95622 1261 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 CST3P01034 146 aaPredicted RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 ARAFP10398 606 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 ELF1P32519 619 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 PTPN9P43378 593 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 NDST1P52848 882 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 PSMA6P60900 246 aaKnown RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 POLR2FP61218 127 aaKnown RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 GOLGA8FQ08AF8 430 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 GOLGA8DPQ0D2H9 430 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 KLHL30Q0D2K2 578 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 PTP4A2Q12974 167 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 ASTE1Q2TB18 679 aaPredicted RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 ARHGAP15Q53QZ3 475 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 C9orf50Q5SZB4 431 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 TXNDC11Q6PKC3 985 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 RSPO2Q6UXX9 243 aaPredicted RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 SLC26A9Q7LBE3 791 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 TRMT1LQ7Z2T5 733 aaKnown RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 ARHGEF19Q8IW93 802 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 SYCE1Q8N0S2 351 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 VPS52Q8N1B4 723 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 C3orf20Q8ND61 904 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 POF1BQ8WVV4 589 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 GOLGA1Q92805 767 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 PSMG2Q969U7 264 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 MCRS1Q96EZ8 462 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 NAP1L5Q96NT1 182 aaPredicted RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 RTP3Q9BQQ7 232 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 FRMD8P1Q9BZ68 369 aaPredicted RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 NKX2-4Q9H2Z4 354 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 TRPV5Q9NQA5 729 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 ENTPD7Q9NQZ7 604 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 CXXC1Q9P0U4 656 aaPredicted RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 RCOR3Q9P2K3 495 aaPredicted RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 YBX2Q9Y2T7 364 aaKnown RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 HES2Q9Y543 173 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 FHOD1Q9Y613 1164 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 RAD54BQ9Y620 910 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 J3QW42 95 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 ENDOD1O94919 500 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 OLFM2O95897 454 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 CYP1A2P05177 515 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 CA3P07451 260 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 H2AFZP0C0S5 128 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 UNGP13051 313 aaPredicted RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 SLC9A1P19634 815 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 TKTP29401 623 aaKnown RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 KRT9P35527 623 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 OSTNP61366 133 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 NOMO3P69849 1222 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 ROR1Q01973 937 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 SMAD4Q13485 552 aaKnown RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 CRTC2Q53ET0 693 aaPredicted RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 BRMS1LQ5PSV4 323 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 LRRC38Q5VT99 294 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 HGSNATQ68CP4 663 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 ISM2Q6H9L7 571 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 C11orf63Q6NUN7 778 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 H2AFVQ71UI9 128 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 STRADAQ7RTN6 431 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 MON1AQ86VX9 555 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 NLRP8Q86W28 1048 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 NUP93Q8N1F7 819 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 TC2NQ8N9U0 490 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 C3orf58Q8NDZ4 430 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 OR6B3Q8NGW1 331 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 CCDC26Q8TAB7 109 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 SLC35F5Q8WV83 523 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 ERCC4Q92889 916 aaPredicted RBP3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 PLD4Q96BZ4 506 aa3.46□□□□□ -1.86
SCAMP1-201ENST00000320280 TBCBQ99426 244 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms