RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 ARHGEF26Q96DR7 871 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 NECTIN4Q96NY8 510 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 SLC2A13Q96QE2 648 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 THAP2Q9H0W7 228 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 ATXN3LQ9H3M9 355 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 CNOT8Q9UFF9 292 aaKnown RBP13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 MRPS23Q9Y3D9 190 aaKnown RBP13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 PCDHA13Q9Y5I0 950 aa13.26□□□□□ -0.29
CHMP2A-201ENST00000312547 SIGLEC16A6NMB1 481 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 GOLGA8SH3BPF8 625 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 MBTPS2O43462 519 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 HSF2BPO75031 334 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 OAS1P00973 400 aaKnown RBP13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 RARGP13631 454 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 GJA1P17302 382 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 CEBPBP17676 345 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 PFKLP17858 780 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 ABCB4P21439 1286 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 FSHRP23945 695 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 DDX6P26196 483 aaKnown RBP eCLIP13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 GPC5P78333 572 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 CYP4F8P98187 520 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 MAMLD1Q13495 774 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 TCEAL1Q15170 157 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 TEAD2Q15562 447 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 TRNP1Q6NT89 227 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 DNAJC24Q6P3W2 148 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 KLHDC10Q6PID8 442 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 PHLDB2Q86SQ0 1253 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 MRPS31Q92665 395 aaKnown RBP13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 ZNF830Q96NB3 372 aaPredicted RBP13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 GCNAQ96QF7 691 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 TRIM62Q9BVG3 475 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 POMKQ9H5K3 350 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 POPDC2Q9HBU9 364 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 ABCC13Q9NSE7 274 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 ZMYM5Q9UJ78 669 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 GREB1Q4ZG55 1949 aa13.25□□□□□ -0.29
CHMP2A-201ENST00000312547 BRWD1Q9NSI6 2320 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 C2orf78A6NCI8 922 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 ATMINO43313 823 aaPredicted RBP13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 COCHO43405 550 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 NRDCO43847 1150 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 DAB1O75553 588 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 GRAP2O75791 330 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 IPO7O95373 1038 aaKnown RBP13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 GJB6O95452 261 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 KRT3P12035 628 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 FLT3P36888 993 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 KRT83P78385 493 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 CBX2Q14781 532 aaPredicted RBP13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 HECTD3Q5T447 861 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 STXBP5Q5T5C0 1151 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 BTBD8Q5XKL5 378 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 TXNDC8Q6A555 127 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 MSANTD2Q6P1R3 559 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 NPAS3Q8IXF0 933 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 JOSD2Q8TAC2 188 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 CTNNBL1Q8WYA6 563 aaPredicted RBP13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 GOLGA1Q92805 767 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 FAM149B1Q96BN6 582 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 CDK5RAP1Q96SZ6 601 aaKnown RBP13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 DESI2Q9BSY9 194 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 SLC46A2Q9BY10 475 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 TASP1Q9H6P5 420 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 CCSER2Q9H7U1 834 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 PRDM6Q9NQX0 595 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 METTL5Q9NRN9 209 aaKnown RBP13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 PARVAQ9NVD7 372 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 NAALADL1Q9UQQ1 740 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 ADGRG1Q9Y653 693 aa13.24□□□□□ -0.29
CHMP2A-201ENST00000312547 NOTCH4Q99466 2003 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 RCCD1A6NED2 376 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 TMEM191CA6NGB0 347 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 C2CD4BA6NLJ0 364 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 PJA2O43164 708 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 TLR5O60602 858 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 IGLV3-25P01717 112 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 RALAP11233 206 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 WEE1P30291 646 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 NOS2P35228 1153 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 RFC1P35251 1148 aaPredicted RBP13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 MATKP42679 507 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 VAV2P52735 878 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 RPL7AP62424 266 aaKnown RBP13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 GPR158Q5T848 1215 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 SYPL2Q5VXT5 272 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 DEFB106AQ8N104 65 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 EMC1Q8N766 993 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 DQX1Q8TE96 717 aaKnown RBP13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 ING5Q8WYH8 240 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 EDEM1Q92611 657 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 FGF13Q92913 245 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 NT5C3BQ969T7 300 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 ZSWIM3Q96MP5 696 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 SLC22A12Q96S37 553 aa13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 DDX23Q9BUQ8 820 aaKnown RBP13.23□□□□□ -0.29
CHMP2A-201ENST00000312547 SELENOOQ9BVL4 669 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms