RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 DNAJC6O75061 913 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 USP1O94782 785 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 ITGA2BP08514 1039 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 DESP17661 470 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 RAP1GDS1P52306 607 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 CDK16Q00536 496 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 SEPT7Q16181 437 aaKnown RBP16.2■□□□□ 0.18
UBAP1-201ENST00000297661 DBN1Q16643 649 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 RAB6CQ53S08 254 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 GADL1Q6ZQY3 521 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 RHPN2Q8IUC4 686 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 LRRN4Q8WUT4 740 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 LENG1Q96BZ8 264 aaPredicted RBP16.2■□□□□ 0.18
UBAP1-201ENST00000297661 NMD3Q96D46 503 aaKnown RBP16.2■□□□□ 0.18
UBAP1-201ENST00000297661 NLRP4Q96MN2 994 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 TMEM120AQ9BXJ8 343 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 RAB6CQ9H0N0 254 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 HSFX1Q9UBD0 423 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 HMGXB4Q9UGU5 601 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 GMEB1Q9Y692 573 aa16.2■□□□□ 0.18
UBAP1-201ENST00000297661 CLUHO75153 1309 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 STAM2O75886 525 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 ATG7O95352 703 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 GRIA2P42262 883 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 KRT72Q14CN4 511 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 LRRC6Q86X45 466 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 ERO1BQ86YB8 467 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 HSPH1Q92598 858 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 MPP4Q96JB8 637 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 CAPNS2Q96L46 248 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 WDR83Q9BRX9 315 aaKnown RBP16.19■□□□□ 0.18
UBAP1-201ENST00000297661 TMEM165Q9HC07 324 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 LRCH4O75427 683 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 VEGFBP49765 207 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 OAZ1P54368 228 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 PSMC1P62191 440 aaKnown RBP16.19■□□□□ 0.18
UBAP1-201ENST00000297661 ENPEPQ07075 957 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 LAMTOR4Q0VGL1 99 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 HIF1AQ16665 826 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 DUOXA2Q1HG44 320 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 SH2D4BQ5SQS7 431 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 RIPOR1Q6ZS17 1223 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 ACAD11Q709F0 780 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 CENPUQ71F23 418 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 WDR49Q8IV35 697 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 ZNF276Q8N554 614 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 NIFKQ9BYG3 293 aaKnown RBP16.19■□□□□ 0.18
UBAP1-201ENST00000297661 KCNK13Q9HB14 408 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 ARMCX1Q9P291 453 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 DOCK1Q14185 1865 aa16.19■□□□□ 0.18
UBAP1-201ENST00000297661 C2orf71A6NGG8 1288 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 C3orf70A6NLC5 250 aaPredicted RBP16.18■□□□□ 0.18
UBAP1-201ENST00000297661 B2RBV5 119 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 TOM1L1O75674 476 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 PRKCBP05771 671 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 KRT3P12035 628 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 ASPAP45381 313 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 AP2B1P63010 937 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 FKBP1BP68106 108 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 TARBP2Q15633 366 aaKnown RBP16.18■□□□□ 0.18
UBAP1-201ENST00000297661 BBS9Q3SYG4 887 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.18■□□□□ 0.18
UBAP1-201ENST00000297661 C1QTNF12Q5T7M4 302 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 SPRYD7Q5W111 196 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 MYLK4Q86YV6 388 aaPredicted RBP16.18■□□□□ 0.18
UBAP1-201ENST00000297661 UNC45BQ8IWX7 931 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 FAM71DQ8N9W8 422 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 PANX3Q96QZ0 392 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 CPXM1Q96SM3 734 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 MRPL4Q9BYD3 311 aaKnown RBP16.18■□□□□ 0.18
UBAP1-201ENST00000297661 PHACTR1Q9C0D0 580 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 MANSC1Q9H8J5 431 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 CLIC5Q9NZA1 410 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 CHMP2BQ9UQN3 213 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 MTO1Q9Y2Z2 717 aaKnown RBP16.18■□□□□ 0.18
UBAP1-201ENST00000297661 H3BRJ5 948 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 ALOX15BO15296 676 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 OR6B1O95007 311 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 MORF4L2Q15014 288 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 SH3PXD2AQ5TCZ1 1133 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 EEF1DP3Q658K8 133 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 NPNTQ6UXI9 565 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 SATL1Q86VE3 508 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 FBXO27Q8NI29 283 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 CCDC110Q8TBZ0 833 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 CPT1BQ92523 772 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 ACO2Q99798 780 aaKnown RBP16.18■□□□□ 0.18
UBAP1-201ENST00000297661 TSSK1BQ9BXA7 367 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 ARHGEF4Q9NR80 690 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 NRBP2Q9NSY0 501 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 BTBD7Q9P203 1132 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 PPM1HQ9ULR3 514 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 FAM155AB1AL88 458 aaPredicted RBP16.18■□□□□ 0.18
UBAP1-201ENST00000297661 INO80B-WBP1J3KQ70 363 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 FCHO1O14526 889 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 MAGEC1O60732 1142 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 TMCC1O94876 653 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 ARIH2O95376 493 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 MAP3K6O95382 1288 aa16.18■□□□□ 0.18
UBAP1-201ENST00000297661 PGK2P07205 417 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms