RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 ACPTQ9BZG2 426 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 ADAM19Q9H013 955 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 SH2D4AQ9H788 454 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 PPP1R14DQ9NXH3 145 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 SLC39A1Q9NY26 324 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 STK17AQ9UEE5 414 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 AGAP1Q9UPQ3 857 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 DOLKQ9UPQ8 538 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 CBY1Q9Y3M2 126 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 HYOU1Q9Y4L1 999 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 LAMB1P07942 1786 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 STRCQ7RTU9 1775 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 NCF1BA6NI72 391 aaPredicted RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 NCF1CA8MVU1 366 aaPredicted RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 C6orf229H3BNL8 230 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 CPB1P15086 417 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 NT5C2P49902 561 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 TKTL1P51854 596 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 LACTBP83111 547 aaPredicted RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 CACNB1Q02641 598 aaPredicted RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 RNASELQ05823 741 aaKnown RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 GFPT1Q06210 699 aaPredicted RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 MXD4Q14582 209 aaPredicted RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 HERC3Q15034 1050 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 TEAD4Q15561 434 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 HADHQ16836 314 aaKnown RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 CFAP221Q4G0U5 840 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 PPP6R3Q5H9R7 873 aaPredicted RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 GRTP1Q5TC63 336 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 CENPPQ6IPU0 288 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 MIGA2Q7L4E1 593 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 TTC13Q8NBP0 860 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 HCAR2Q8TDS4 363 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 RAD54LQ92698 747 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 CHCHD6Q9BRQ6 235 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.67□□□□□ -1.02
SPARC-201ENST00000231061 FRMD8P1Q9BZ68 369 aaPredicted RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 TFB2MQ9H5Q4 396 aaKnown RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 DENND2DQ9H6A0 471 aaPredicted RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 CD209Q9NNX6 404 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 CPNE7Q9UBL6 633 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 ZNF69Q9UC07 566 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 VPS51Q9UID3 782 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 POLHQ9Y253 713 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 CYP3A7-CYP3A51PA0A087WV96 503 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 SYF2O95926 243 aaKnown RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 CYP3A7P24462 503 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 SLC26A3P40879 764 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 RHAGQ02094 409 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 IFFO1Q0D2I5 559 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 IKBKEQ14164 716 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 NDUFA5Q16718 116 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 PDCD4Q53EL6 469 aaKnown RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 CCNI2Q6ZMN8 369 aaPredicted RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 TRIM67Q6ZTA4 783 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 PLEKHM3Q6ZWE6 761 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 TMC7Q7Z402 723 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 AMIGO3Q86WK7 504 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 ZSCAN29Q8IWY8 852 aaPredicted RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 ZNF248Q8NDW4 579 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 METTL21AQ8WXB1 218 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 LRRC1Q9BTT6 524 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 LSM14BQ9BX40 385 aaKnown RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 VIPAS39Q9H9C1 493 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 HPF1Q9NWY4 346 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 TXNDC16Q9P2K2 825 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 GTF2IRD1Q9UHL9 959 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 GGA1Q9UJY5 639 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 PLAGL2Q9UPG8 496 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 SIK3Q9Y2K2 1263 aa8.67□□□□□ -1.02
SPARC-201ENST00000231061 COL22A1Q8NFW1 1626 aaPredicted RBP8.67□□□□□ -1.02
SPARC-201ENST00000231061 KIAA1551Q9HCM1 1747 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 GOLGA8QA0A0J9YX86 632 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 SYCE1LA8MT33 242 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 FSCN2O14926 492 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 XPO1O14980 1071 aaKnown RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 GAS8O95995 478 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 IFNB1P01574 187 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 ARL1P40616 181 aaPredicted RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 EIF2B2P49770 351 aaKnown RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 SERINC3Q13530 473 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 PLA2G4EQ3MJ16 856 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 PLEKHG4Q58EX7 1191 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 FIGNQ5HY92 759 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 FAM122CQ6P4D5 195 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 KCNK18Q7Z418 384 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 VSIG1Q86XK7 387 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 GLYCTKQ8IVS8 523 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 GUF1Q8N442 669 aaKnown RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 ALLCQ8N6M5 410 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 EFHBQ8N7U6 833 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 C3orf58Q8NDZ4 430 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 LENG1Q96BZ8 264 aaPredicted RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 PACSIN1Q9BY11 444 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 UNKQ9C0B0 810 aaKnown RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 MRPL47Q9HD33 250 aaKnown RBP8.66□□□□□ -1.02
SPARC-201ENST00000231061 SNED1Q8TER0 1413 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 C1orf232A0A0U1RR37 186 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 PVALEFA0A1B0GWK0 134 aa8.66□□□□□ -1.02
SPARC-201ENST00000231061 KRT87PA6NCN2 255 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms