RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 TJP2Q9UDY2 1190 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 NOTCH4Q99466 2003 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 PTMAP06454 111 aaKnown RBP21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 HDCP19113 662 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 FECHP22830 423 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 ATP5C1P36542 298 aaKnown RBP21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 GSCP56915 257 aaPredicted RBP21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 BEND5Q7L4P6 421 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 SLC26A9Q7LBE3 791 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 SCD5Q86SK9 330 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 ZNF276Q8N554 614 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 MCRS1Q96EZ8 462 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 ISCUQ9H1K1 167 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 NMUR1Q9HB89 426 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 TAS2R14Q9NYV8 317 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 PRKAG3Q9UGI9 489 aa21.15■□□□□ 0.98
RHBDD3-201ENST00000216085 DOCK6Q96HP0 2047 aa21.14■□□□□ 0.98
RHBDD3-201ENST00000216085 ANKRD62A6NC57 917 aa21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 GOLGA8SH3BPF8 625 aa21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 OAS1P00973 400 aaKnown RBP21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 IL9P15248 144 aa21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 SPA17Q15506 151 aa21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 ASTE1Q2TB18 679 aaPredicted RBP21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 C2CD6Q53TS8 623 aa21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 C10orf120Q5SQS8 335 aa21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 DNAJC24Q6P3W2 148 aa21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 KLHDC10Q6PID8 442 aa21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 CMTM8Q8IZV2 173 aa21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 C3orf20Q8ND61 904 aa21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 NDRG1Q92597 394 aaKnown RBP21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 SELENOOQ9BVL4 669 aa21.14■□□□□ 0.97
RHBDD3-201ENST00000216085 C2orf78A6NCI8 922 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 LAMP2P13473 410 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 NCAM1P13591 858 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 KCNQ1P51787 676 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 C10orf76Q5T2E6 689 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 STXBP5Q5T5C0 1151 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 MTSS1LQ765P7 747 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 BHLHA9Q7RTU4 235 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 ZSCAN18Q8TBC5 510 aaPredicted RBP21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 ZNF653Q96CK0 615 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 RPGRIP1Q96KN7 1286 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 MYADMQ96S97 322 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 CCSER2Q9H7U1 834 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 EPS15L1Q9UBC2 864 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 DNMT3LQ9UJW3 386 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 SCINQ9Y6U3 715 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 DPYSL4O14531 572 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 OBSL1O75147 1896 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 MBL2P11226 248 aaPredicted RBP21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 DESP17661 470 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 SP100P23497 879 aaPredicted RBP21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 WEE1P30291 646 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 PTP4A2Q12974 167 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 SMARCD2Q92925 531 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 E2F7Q96AV8 911 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 ASB2Q96Q27 587 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 SLC46A2Q9BY10 475 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 KIF9Q9HAQ2 790 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 PARVAQ9NVD7 372 aa21.13■□□□□ 0.97
RHBDD3-201ENST00000216085 COCHO43405 550 aa21.12■□□□□ 0.97
RHBDD3-201ENST00000216085 DAB1O75553 588 aa21.12■□□□□ 0.97
RHBDD3-201ENST00000216085 DDX42Q86XP3 938 aaKnown RBP eCLIP21.12■□□□□ 0.97
RHBDD3-201ENST00000216085 ARL14EPQ8N8R7 260 aaPredicted RBP21.12■□□□□ 0.97
RHBDD3-201ENST00000216085 CTNNBL1Q8WYA6 563 aaPredicted RBP21.12■□□□□ 0.97
RHBDD3-201ENST00000216085 EDEM1Q92611 657 aa21.12■□□□□ 0.97
RHBDD3-201ENST00000216085 MRPL47Q9HD33 250 aaKnown RBP21.12■□□□□ 0.97
RHBDD3-201ENST00000216085 SPTLC3Q9NUV7 552 aa21.12■□□□□ 0.97
RHBDD3-201ENST00000216085 OSER1Q9NX31 292 aa21.12■□□□□ 0.97
RHBDD3-201ENST00000216085 RRN3Q9NYV6 651 aa21.12■□□□□ 0.97
RHBDD3-201ENST00000216085 STAP1Q9ULZ2 295 aa21.12■□□□□ 0.97
RHBDD3-201ENST00000216085 OLFM2O95897 454 aa21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 KRT3P12035 628 aa21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 ABCB4P21439 1286 aa21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 RRM1P23921 792 aa21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 DEKP35659 375 aaKnown RBP21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 HFE2Q6ZVN8 426 aa21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 ARCQ7LC44 396 aa21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 ADHFE1Q8IWW8 467 aa21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 PIWIL1Q96J94 861 aaKnown RBP21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 ASB16Q96NS5 453 aa21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 METTL5Q9NRN9 209 aaKnown RBP21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 CNOT8Q9UFF9 292 aaKnown RBP21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 DENND4CQ5VZ89 1909 aa21.11■□□□□ 0.97
RHBDD3-201ENST00000216085 SOWAHDA6NJG2 315 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 C2CD4DB7Z1M9 353 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 GRAP2O75791 330 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 H2AFZP0C0S5 128 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 PGFP49763 221 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 RNASE9P60153 205 aaKnown RBP21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 SLC7A9P82251 487 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 CCDC173Q0VFZ6 552 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 EFEMP1Q12805 493 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 DCAF6Q58WW2 860 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 DCUN1D2Q6PH85 259 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 H2AFVQ71UI9 128 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 ARID3BQ8IVW6 561 aaPredicted RBP21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 ZDHHC14Q8IZN3 488 aa21.1■□□□□ 0.97
RHBDD3-201ENST00000216085 TXLNBQ8N3L3 684 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms