RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 LIP1Q03579 150 aa1.62□□□□□ -2.15
snR42snR42 YOL013W-AP0C272 63 aaPredicted RBP1.61□□□□□ -2.15
snR42snR42 YOR314WQ12506 109 aa1.6□□□□□ -2.15
snR42snR42 YIL156W-BQ2V2P4 73 aa1.6□□□□□ -2.15
snR42snR42 YGR146C-AQ8TGT9 53 aa1.6□□□□□ -2.15
snR42snR42 RPS30AP0CX33 63 aaKnown RBP1.59□□□□□ -2.15
snR42snR42 RPS30BP0CX34 63 aaKnown RBP1.59□□□□□ -2.15
snR42snR42 OLI1P61829 76 aa1.59□□□□□ -2.15
snR42snR42 YKL065W-AQ2V2P2 73 aa1.59□□□□□ -2.15
snR42snR42 YML054C-AQ3E809 52 aa1.59□□□□□ -2.15
snR42snR42 YBR016WP38216 128 aa1.58□□□□□ -2.16
snR42snR42 SLO1Q3E784 85 aa1.58□□□□□ -2.16
snR42snR42 YLR255CO13574 117 aa1.57□□□□□ -2.16
snR42snR42 YFL065CP43539 102 aa1.57□□□□□ -2.16
snR42snR42 YPR203WQ08994 102 aa1.57□□□□□ -2.16
snR42snR42 NOP10Q6Q547 58 aaPredicted RBP1.57□□□□□ -2.16
snR42snR42 YBL044WP38194 122 aa1.55□□□□□ -2.16
snR42snR42 YHR125WP38831 101 aa1.54□□□□□ -2.16
snR42snR42 RPS29BP41058 56 aaKnown RBP1.54□□□□□ -2.16
snR42snR42 YFR032C-BQ8TGU2 87 aa1.54□□□□□ -2.16
snR42snR42 RPS29AP41057 56 aaKnown RBP1.53□□□□□ -2.16
snR42snR42 YBR201C-AQ2V2Q3 67 aa1.53□□□□□ -2.16
snR42snR42 AIM4P38305 123 aaPredicted RBP1.52□□□□□ -2.17
snR42snR42 MRX7P53869 86 aa1.52□□□□□ -2.17
snR42snR42 OST5Q92316 86 aa1.52□□□□□ -2.17
snR42snR42 YHR032W-AP0C5N6 59 aa1.5□□□□□ -2.17
snR42snR42 SDH6Q3E785 79 aa1.5□□□□□ -2.17
snR42snR42 YOL166W-AQ8TGJ1 51 aa1.5□□□□□ -2.17
snR42snR42 YPL038W-AQ3E7B4 63 aa1.49□□□□□ -2.17
snR42snR42 RUB1Q03919 77 aa1.48□□□□□ -2.17
snR42snR42 YDR182W-AQ3E796 67 aa1.48□□□□□ -2.17
snR42snR42 YDR119W-AQ2V2P9 66 aa1.47□□□□□ -2.17
snR42snR42 YDR246W-AQ3E763 66 aa1.47□□□□□ -2.17
snR42snR42 HUB1Q6Q546 73 aa1.46□□□□□ -2.18
snR42snR42 YMR001C-AQ8TGS9 76 aa1.45□□□□□ -2.18
snR42snR42 RPL37AP49166 88 aaKnown RBP1.44□□□□□ -2.18
snR42snR42 YOR394C-AQ8TGJ0 55 aa1.44□□□□□ -2.18
snR42snR42 RPS28BP0C0X0 67 aaKnown RBP1.43□□□□□ -2.18
snR42snR42 YLR412C-AQ3E742 68 aa1.43□□□□□ -2.18
snR42snR42 RPS28AQ3E7X9 67 aaPredicted RBP1.43□□□□□ -2.18
snR42snR42 YML100W-AQ8TGT0 57 aa1.43□□□□□ -2.18
snR42snR42 TOM6P33448 61 aa1.42□□□□□ -2.18
snR42snR42 ATP17Q06405 101 aa1.39□□□□□ -2.19
snR42snR42 SBH1P52870 82 aa1.36□□□□□ -2.19
snR42snR42 YER188C-AP0C0V2 99 aa1.34□□□□□ -2.19
snR42snR42 YMR122CQ03879 124 aa1.34□□□□□ -2.19
snR42snR42 YCR108CQ3E819 63 aa1.32□□□□□ -2.2
snR42snR42 YEL014CP39999 101 aa1.31□□□□□ -2.2
snR42snR42 YHR086W-AQ3E746 53 aa1.31□□□□□ -2.2
snR42snR42 YCR095W-AQ3E787 52 aa1.31□□□□□ -2.2
snR42snR42 YOR381W-AQ3E804 55 aa1.31□□□□□ -2.2
snR42snR42 YOR072W-BQ3E832 53 aa1.31□□□□□ -2.2
snR42snR42 QCR10P37299 77 aa1.2□□□□□ -2.22
snR42snR42 HHY1P39982 102 aa1.2□□□□□ -2.22
snR42snR42 YNL277W-AQ3E7Z0 62 aa1.18□□□□□ -2.22
snR42snR42 SOM1Q05676 74 aa1.15□□□□□ -2.23
snR42snR42 YIR021W-AQ3E739 70 aa1.14□□□□□ -2.23
snR42snR42 YBR072C-AQ3E794 53 aa1.12□□□□□ -2.23
snR42snR42 YHR050W-AQ05451 56 aa1.1□□□□□ -2.23
snR42snR42 YGL014C-AP0C5N1 53 aa1.09□□□□□ -2.23
snR42snR42 YOR376W-AQ3E805 51 aa1.03□□□□□ -2.24
snR42snR42 YLR157W-EP0CF00 54 aa0.86□□□□□ -2.27
snR42snR42 YOL164W-AQ3E7A5 60 aa0.8□□□□□ -2.28
Retrieved 63 of 5,963 RNA–protein pairs in 24.1 ms