RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C RPS28BP0C0X0 67 aaKnown RBP4.84□□□□□ -1.63
SRP54YPR088C YGR164WP53291 111 aa4.84□□□□□ -1.63
SRP54YPR088C RPS28AQ3E7X9 67 aaPredicted RBP4.84□□□□□ -1.63
SRP54YPR088C YOR316C-AQ3E806 69 aa4.84□□□□□ -1.63
SRP54YPR088C HHF1P02309 103 aaKnown RBP4.83□□□□□ -1.64
SRP54YPR088C YJR128WP47162 119 aa4.81□□□□□ -1.64
SRP54YPR088C YHR125WP38831 101 aa4.77□□□□□ -1.65
SRP54YPR088C YGR146C-AQ8TGT9 53 aa4.74□□□□□ -1.65
SRP54YPR088C YLR255CO13574 117 aa4.72□□□□□ -1.65
SRP54YPR088C RPS30AP0CX33 63 aaKnown RBP4.71□□□□□ -1.66
SRP54YPR088C RPS30BP0CX34 63 aaKnown RBP4.71□□□□□ -1.66
SRP54YPR088C COX8P04039 78 aa4.7□□□□□ -1.66
SRP54YPR088C YJL144WP47009 104 aa4.7□□□□□ -1.66
SRP54YPR088C RPL37BP51402 88 aaKnown RBP4.7□□□□□ -1.66
SRP54YPR088C YKL065W-AQ2V2P2 73 aa4.7□□□□□ -1.66
SRP54YPR088C SDH6Q3E785 79 aa4.67□□□□□ -1.66
SRP54YPR088C YFR032C-BQ8TGU2 87 aa4.66□□□□□ -1.66
SRP54YPR088C YBR016WP38216 128 aa4.64□□□□□ -1.67
SRP54YPR088C YBL008W-AQ3E821 79 aa4.64□□□□□ -1.67
SRP54YPR088C YGL034CP53186 121 aa4.6□□□□□ -1.67
SRP54YPR088C OST5Q92316 86 aa4.59□□□□□ -1.67
SRP54YPR088C OLI1P61829 76 aa4.58□□□□□ -1.68
SRP54YPR088C YMR001C-AQ8TGS9 76 aa4.58□□□□□ -1.68
SRP54YPR088C YIL156W-BQ2V2P4 73 aa4.57□□□□□ -1.68
SRP54YPR088C FYV12Q08559 129 aa4.57□□□□□ -1.68
SRP54YPR088C Q0017Q9ZZX8 53 aa4.57□□□□□ -1.68
SRP54YPR088C YIR021W-AQ3E739 70 aa4.56□□□□□ -1.68
SRP54YPR088C YBR201C-AQ2V2Q3 67 aa4.55□□□□□ -1.68
SRP54YPR088C HUB1Q6Q546 73 aa4.53□□□□□ -1.68
SRP54YPR088C MRX7P53869 86 aa4.51□□□□□ -1.69
SRP54YPR088C YJL009WP47078 108 aa4.46□□□□□ -1.7
SRP54YPR088C YMR122CQ03879 124 aa4.43□□□□□ -1.7
SRP54YPR088C YOR381W-AQ3E804 55 aa4.42□□□□□ -1.7
SRP54YPR088C YNL277W-AQ3E7Z0 62 aa4.37□□□□□ -1.71
SRP54YPR088C YDR210WQ03482 75 aa4.34□□□□□ -1.71
SRP54YPR088C SBH1P52870 82 aa4.32□□□□□ -1.72
SRP54YPR088C YML054C-AQ3E809 52 aa4.32□□□□□ -1.72
SRP54YPR088C YER188C-AP0C0V2 99 aa4.32□□□□□ -1.72
SRP54YPR088C YBL044WP38194 122 aa4.32□□□□□ -1.72
SRP54YPR088C YLR412C-AQ3E742 68 aa4.32□□□□□ -1.72
SRP54YPR088C YCR095W-AQ3E787 52 aa4.32□□□□□ -1.72
SRP54YPR088C YML100W-AQ8TGT0 57 aa4.3□□□□□ -1.72
SRP54YPR088C YER078W-AQ3E7A2 54 aa4.26□□□□□ -1.73
SRP54YPR088C YOR394C-AQ8TGJ0 55 aa4.23□□□□□ -1.73
SRP54YPR088C ATP17Q06405 101 aa4.21□□□□□ -1.73
SRP54YPR088C YAL067W-AQ8TGK6 75 aa4.18□□□□□ -1.74
SRP54YPR088C YOR376W-AQ3E805 51 aa4.17□□□□□ -1.74
SRP54YPR088C YCR108CQ3E819 63 aa4.09□□□□□ -1.76
SRP54YPR088C YHR032W-AP0C5N6 59 aa4.06□□□□□ -1.76
SRP54YPR088C YEL014CP39999 101 aa4.06□□□□□ -1.76
SRP54YPR088C RPL37AP49166 88 aaKnown RBP4.05□□□□□ -1.76
SRP54YPR088C QCR10P37299 77 aa3.99□□□□□ -1.77
SRP54YPR088C SOM1Q05676 74 aa3.98□□□□□ -1.77
SRP54YPR088C YOR072W-BQ3E832 53 aa3.88□□□□□ -1.79
SRP54YPR088C YGL014C-AP0C5N1 53 aa3.82□□□□□ -1.8
SRP54YPR088C RPS29BP41058 56 aaKnown RBP3.74□□□□□ -1.81
SRP54YPR088C HHY1P39982 102 aa3.67□□□□□ -1.82
SRP54YPR088C RPS29AP41057 56 aaKnown RBP3.61□□□□□ -1.83
SRP54YPR088C YBR072C-AQ3E794 53 aa3.59□□□□□ -1.84
SRP54YPR088C YHR086W-AQ3E746 53 aa3.27□□□□□ -1.89
SRP54YPR088C YHR050W-AQ05451 56 aa3.18□□□□□ -1.9
SRP54YPR088C YOL164W-AQ3E7A5 60 aa2.69□□□□□ -1.98
SRP54YPR088C YLR157W-EP0CF00 54 aa2.56□□□□□ -2
Retrieved 63 of 5,963 RNA–protein pairs in 5.2 ms