RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W YDL012CQ12489 107 aa5.48□□□□□ -1.53
MSF1YPR047W YHR073W-AP0C5N7 58 aa5.46□□□□□ -1.54
MSF1YPR047W RPS30AP0CX33 63 aaKnown RBP5.46□□□□□ -1.54
MSF1YPR047W RPS30BP0CX34 63 aaKnown RBP5.46□□□□□ -1.54
MSF1YPR047W SBH1P52870 82 aa5.45□□□□□ -1.54
MSF1YPR047W YHR125WP38831 101 aa5.43□□□□□ -1.54
MSF1YPR047W YJR128WP47162 119 aa5.4□□□□□ -1.55
MSF1YPR047W SDH6Q3E785 79 aa5.36□□□□□ -1.55
MSF1YPR047W YGR164WP53291 111 aa5.34□□□□□ -1.55
MSF1YPR047W YKL065W-AQ2V2P2 73 aa5.33□□□□□ -1.56
MSF1YPR047W HHF1P02309 103 aaKnown RBP5.31□□□□□ -1.56
MSF1YPR047W YDR210WQ03482 75 aa5.31□□□□□ -1.56
MSF1YPR047W YOR316C-AQ3E806 69 aa5.31□□□□□ -1.56
MSF1YPR047W YJL009WP47078 108 aa5.3□□□□□ -1.56
MSF1YPR047W HUB1Q6Q546 73 aa5.3□□□□□ -1.56
MSF1YPR047W YOR381W-AQ3E804 55 aa5.29□□□□□ -1.56
MSF1YPR047W YMR122CQ03879 124 aa5.28□□□□□ -1.56
MSF1YPR047W YMR001C-AQ8TGS9 76 aa5.28□□□□□ -1.56
MSF1YPR047W YLR255CO13574 117 aa5.26□□□□□ -1.57
MSF1YPR047W YLR412C-AQ3E742 68 aa5.26□□□□□ -1.57
MSF1YPR047W YGR146C-AQ8TGT9 53 aa5.26□□□□□ -1.57
MSF1YPR047W YFR032C-BQ8TGU2 87 aa5.26□□□□□ -1.57
MSF1YPR047W YJL144WP47009 104 aa5.22□□□□□ -1.57
MSF1YPR047W YGL034CP53186 121 aa5.21□□□□□ -1.58
MSF1YPR047W OST5Q92316 86 aa5.21□□□□□ -1.58
MSF1YPR047W COX8P04039 78 aa5.2□□□□□ -1.58
MSF1YPR047W YER188C-AP0C0V2 99 aa5.19□□□□□ -1.58
MSF1YPR047W YBR121C-AP0C5L4 52 aa5.15□□□□□ -1.58
MSF1YPR047W YBL008W-AQ3E821 79 aa5.14□□□□□ -1.59
MSF1YPR047W RPS28BP0C0X0 67 aaKnown RBP5.13□□□□□ -1.59
MSF1YPR047W RPS28AQ3E7X9 67 aaPredicted RBP5.13□□□□□ -1.59
MSF1YPR047W YBR016WP38216 128 aa5.12□□□□□ -1.59
MSF1YPR047W YBR201C-AQ2V2Q3 67 aa5.12□□□□□ -1.59
MSF1YPR047W YCR095W-AQ3E787 52 aa5.1□□□□□ -1.59
MSF1YPR047W OLI1P61829 76 aa5.08□□□□□ -1.6
MSF1YPR047W MRX7P53869 86 aa5.06□□□□□ -1.6
MSF1YPR047W YIL156W-BQ2V2P4 73 aa5.03□□□□□ -1.6
MSF1YPR047W ATP17Q06405 101 aa5□□□□□ -1.61
MSF1YPR047W YNL277W-AQ3E7Z0 62 aa4.98□□□□□ -1.61
MSF1YPR047W YER175W-AQ8TGU4 54 aa4.93□□□□□ -1.62
MSF1YPR047W RPS29BP41058 56 aaKnown RBP4.91□□□□□ -1.62
MSF1YPR047W YML054C-AQ3E809 52 aa4.91□□□□□ -1.62
MSF1YPR047W RPS29AP41057 56 aaKnown RBP4.89□□□□□ -1.63
MSF1YPR047W YBL044WP38194 122 aa4.77□□□□□ -1.65
MSF1YPR047W YOR394C-AQ8TGJ0 55 aa4.72□□□□□ -1.65
MSF1YPR047W YML100W-AQ8TGT0 57 aa4.71□□□□□ -1.66
MSF1YPR047W YEL014CP39999 101 aa4.68□□□□□ -1.66
MSF1YPR047W QCR10P37299 77 aa4.66□□□□□ -1.66
MSF1YPR047W YCR108CQ3E819 63 aa4.65□□□□□ -1.66
MSF1YPR047W YOR376W-AQ3E805 51 aa4.64□□□□□ -1.67
MSF1YPR047W YGL014C-AP0C5N1 53 aa4.63□□□□□ -1.67
MSF1YPR047W RPL37AP49166 88 aaKnown RBP4.62□□□□□ -1.67
MSF1YPR047W SOM1Q05676 74 aa4.42□□□□□ -1.7
MSF1YPR047W YOR072W-BQ3E832 53 aa4.38□□□□□ -1.71
MSF1YPR047W HHY1P39982 102 aa4.21□□□□□ -1.73
MSF1YPR047W YBR072C-AQ3E794 53 aa4.21□□□□□ -1.74
MSF1YPR047W YER078W-AQ3E7A2 54 aa4.02□□□□□ -1.77
MSF1YPR047W YHR050W-AQ05451 56 aa3.54□□□□□ -1.84
MSF1YPR047W YAL067W-AQ8TGK6 75 aa3.38□□□□□ -1.87
MSF1YPR047W YOL164W-AQ3E7A5 60 aa3.27□□□□□ -1.89
MSF1YPR047W YHR032W-AP0C5N6 59 aa3□□□□□ -1.93
MSF1YPR047W YLR157W-EP0CF00 54 aa2.93□□□□□ -1.94
MSF1YPR047W YHR086W-AQ3E746 53 aa2.56□□□□□ -2
Retrieved 63 of 5,963 RNA–protein pairs in 12.1 ms