RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C YOR072WQ08486 104 aa2.8□□□□□ -1.96
GDE1YPL110C YOR394C-AQ8TGJ0 55 aa2.8□□□□□ -1.96
GDE1YPL110C HOR7Q05827 59 aa2.79□□□□□ -1.96
GDE1YPL110C GIS2P53849 153 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
GDE1YPL110C FAB1P34756 2278 aa2.78□□□□□ -1.96
GDE1YPL110C COX7P10174 60 aa2.77□□□□□ -1.97
GDE1YPL110C RDS3Q06835 107 aaPredicted RBP2.77□□□□□ -1.97
GDE1YPL110C YJL144WP47009 104 aa2.76□□□□□ -1.97
GDE1YPL110C YDR524C-BQ3E6R4 66 aa2.76□□□□□ -1.97
GDE1YPL110C YHR007C-AQ07074 71 aa2.75□□□□□ -1.97
GDE1YPL110C YMR230W-AQ3E7B5 62 aa2.75□□□□□ -1.97
GDE1YPL110C RPC10P40422 70 aa2.75□□□□□ -1.97
GDE1YPL110C YGR146C-AQ8TGT9 53 aa2.74□□□□□ -1.97
GDE1YPL110C RPL37BP51402 88 aaKnown RBP2.73□□□□□ -1.97
GDE1YPL110C YDR034W-BQ6Q5X2 51 aa2.72□□□□□ -1.97
GDE1YPL110C RPL39P04650 51 aa2.72□□□□□ -1.97
GDE1YPL110C YJR128WP47162 119 aa2.71□□□□□ -1.98
GDE1YPL110C POL2P21951 2222 aaKnown RBP2.69□□□□□ -1.98
GDE1YPL110C RPL43AP0CX25 92 aaKnown RBP2.69□□□□□ -1.98
GDE1YPL110C RPL43BP0CX26 92 aa2.69□□□□□ -1.98
GDE1YPL110C TAR1Q8TGM6 124 aa2.69□□□□□ -1.98
GDE1YPL110C YJL009WP47078 108 aa2.67□□□□□ -1.98
GDE1YPL110C YCR108CQ3E819 63 aa2.66□□□□□ -1.98
GDE1YPL110C LCL1Q02786 101 aa2.65□□□□□ -1.98
GDE1YPL110C OLI1P61829 76 aa2.65□□□□□ -1.99
GDE1YPL110C YHR073W-AP0C5N7 58 aa2.64□□□□□ -1.99
GDE1YPL110C YBR016WP38216 128 aa2.63□□□□□ -1.99
GDE1YPL110C YOR316C-AQ3E806 69 aa2.61□□□□□ -1.99
GDE1YPL110C URA2P07259 2214 aaKnown RBP2.6□□□□□ -1.99
GDE1YPL110C YBL044WP38194 122 aa2.55□□□□□ -2
GDE1YPL110C YGL260WP53056 76 aa2.54□□□□□ -2
GDE1YPL110C YBR072C-AQ3E794 53 aa2.52□□□□□ -2.01
GDE1YPL110C YLL066W-BQ8TGJ7 56 aa2.49□□□□□ -2.01
GDE1YPL110C RPL37AP49166 88 aaKnown RBP2.46□□□□□ -2.02
GDE1YPL110C HFA1P32874 2273 aa2.45□□□□□ -2.02
GDE1YPL110C YBR056W-AI2HB52 66 aa2.43□□□□□ -2.02
GDE1YPL110C HHY1P39982 102 aa2.4□□□□□ -2.02
GDE1YPL110C YDR034C-AP0C289 58 aa2.37□□□□□ -2.03
GDE1YPL110C GCN1P33892 2672 aaKnown RBP2.35□□□□□ -2.03
GDE1YPL110C YHR086W-AQ3E746 53 aa2.34□□□□□ -2.04
GDE1YPL110C YOR072W-BQ3E832 53 aa2.34□□□□□ -2.04
GDE1YPL110C YHR212W-AP0CX91 67 aa2.32□□□□□ -2.04
GDE1YPL110C TEL1P38110 2787 aa2.29□□□□□ -2.04
GDE1YPL110C FMP27Q06179 2628 aa2.22□□□□□ -2.05
GDE1YPL110C Q0297Q9ZZV8 51 aa2.21□□□□□ -2.06
GDE1YPL110C NUM1Q00402 2748 aa2.21□□□□□ -2.06
GDE1YPL110C YPR117WQ06116 2489 aa2.2□□□□□ -2.06
GDE1YPL110C MDN1Q12019 4910 aaKnown RBP2.18□□□□□ -2.06
GDE1YPL110C YOL164W-AQ3E7A5 60 aa2.15□□□□□ -2.07
GDE1YPL110C TAO3P40468 2376 aa2.14□□□□□ -2.07
GDE1YPL110C TOR1P35169 2470 aa2.13□□□□□ -2.07
GDE1YPL110C MEC1P38111 2368 aa2.09□□□□□ -2.07
GDE1YPL110C PRP8P33334 2413 aaKnown RBP2.04□□□□□ -2.08
GDE1YPL110C CUP1-1P0CX80 61 aa2.03□□□□□ -2.08
GDE1YPL110C CUP1-2P0CX81 61 aa2.03□□□□□ -2.08
GDE1YPL110C YML054C-AQ3E809 52 aa2.02□□□□□ -2.09
GDE1YPL110C TOR2P32600 2474 aaKnown RBP1.98□□□□□ -2.09
GDE1YPL110C UTP20P35194 2493 aaKnown RBP1.94□□□□□ -2.1
GDE1YPL110C YLR157W-EP0CF00 54 aa1.94□□□□□ -2.1
GDE1YPL110C Q0017Q9ZZX8 53 aa1.91□□□□□ -2.1
GDE1YPL110C RPS29AP41057 56 aaKnown RBP1.83□□□□□ -2.12
GDE1YPL110C YHR050W-AQ05451 56 aa1.8□□□□□ -2.12
GDE1YPL110C RPS29BP41058 56 aaKnown RBP1.71□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 11.9 ms