RNA–Protein interactions for RNA: YOR303W

CPA1, Transcript of Small subunit of carbamoyl phosphate synthetase, yeastyeast

Gene CPA1, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPA1YOR303W YGR146C-AQ8TGT9 53 aa3.63□□□□□ -1.83
CPA1YOR303W YFL067WP43537 175 aa3.62□□□□□ -1.83
CPA1YOR303W YJR085CP47131 105 aaKnown RBP3.62□□□□□ -1.83
CPA1YOR303W YLR255CO13574 117 aa3.61□□□□□ -1.83
CPA1YOR303W GIS2P53849 153 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
CPA1YOR303W YCL042WP25572 119 aa3.56□□□□□ -1.84
CPA1YOR303W YJR128WP47162 119 aa3.55□□□□□ -1.84
CPA1YOR303W TOM1Q03280 3268 aa3.53□□□□□ -1.84
CPA1YOR303W RPL37BP51402 88 aaKnown RBP3.53□□□□□ -1.84
CPA1YOR303W YAL067W-AQ8TGK6 75 aa3.53□□□□□ -1.84
CPA1YOR303W YOR316C-AQ3E806 69 aa3.52□□□□□ -1.85
CPA1YOR303W YHR073W-AP0C5N7 58 aa3.51□□□□□ -1.85
CPA1YOR303W URA2P07259 2214 aaKnown RBP3.51□□□□□ -1.85
CPA1YOR303W YJL144WP47009 104 aa3.5□□□□□ -1.85
CPA1YOR303W YBL044WP38194 122 aa3.49□□□□□ -1.85
CPA1YOR303W YJL009WP47078 108 aa3.49□□□□□ -1.85
CPA1YOR303W TAR1Q8TGM6 124 aa3.49□□□□□ -1.85
CPA1YOR303W LCL1Q02786 101 aa3.44□□□□□ -1.86
CPA1YOR303W YCR108CQ3E819 63 aa3.44□□□□□ -1.86
CPA1YOR303W YDR034W-BQ6Q5X2 51 aa3.43□□□□□ -1.86
CPA1YOR303W YBR072C-AQ3E794 53 aa3.41□□□□□ -1.86
CPA1YOR303W YMR230W-AQ3E7B5 62 aa3.4□□□□□ -1.87
CPA1YOR303W RPL43AP0CX25 92 aaKnown RBP3.39□□□□□ -1.87
CPA1YOR303W RPL43BP0CX26 92 aa3.39□□□□□ -1.87
CPA1YOR303W YBR016WP38216 128 aa3.39□□□□□ -1.87
CPA1YOR303W HFA1P32874 2273 aa3.39□□□□□ -1.87
CPA1YOR303W YGL260WP53056 76 aa3.36□□□□□ -1.87
CPA1YOR303W VPS13Q07878 3144 aa3.33□□□□□ -1.88
CPA1YOR303W YLL066W-BQ8TGJ7 56 aa3.32□□□□□ -1.88
CPA1YOR303W YHR212W-AP0CX91 67 aa3.3□□□□□ -1.88
CPA1YOR303W YOR072W-BQ3E832 53 aa3.28□□□□□ -1.88
CPA1YOR303W HHY1P39982 102 aa3.26□□□□□ -1.89
CPA1YOR303W YDR034C-AP0C289 58 aa3.25□□□□□ -1.89
CPA1YOR303W RPL37AP49166 88 aaKnown RBP3.21□□□□□ -1.9
CPA1YOR303W TAO3P40468 2376 aa3.2□□□□□ -1.9
CPA1YOR303W IRA2P19158 3079 aa3.15□□□□□ -1.9
CPA1YOR303W YPR117WQ06116 2489 aa3.14□□□□□ -1.91
CPA1YOR303W CUP1-1P0CX80 61 aa3.07□□□□□ -1.92
CPA1YOR303W CUP1-2P0CX81 61 aa3.07□□□□□ -1.92
CPA1YOR303W Q0297Q9ZZV8 51 aa3.07□□□□□ -1.92
CPA1YOR303W MEC1P38111 2368 aa3.04□□□□□ -1.92
CPA1YOR303W GCN1P33892 2672 aaKnown RBP3□□□□□ -1.93
CPA1YOR303W YML054C-AQ3E809 52 aa2.99□□□□□ -1.93
CPA1YOR303W PRP8P33334 2413 aaKnown RBP2.96□□□□□ -1.94
CPA1YOR303W CSF1Q12150 2958 aa2.95□□□□□ -1.94
CPA1YOR303W YBR056W-AI2HB52 66 aa2.94□□□□□ -1.94
CPA1YOR303W FMP27Q06179 2628 aa2.93□□□□□ -1.94
CPA1YOR303W UTP20P35194 2493 aaKnown RBP2.9□□□□□ -1.95
CPA1YOR303W TOR2P32600 2474 aaKnown RBP2.87□□□□□ -1.95
CPA1YOR303W YOL164W-AQ3E7A5 60 aa2.85□□□□□ -1.95
CPA1YOR303W YHR086W-AQ3E746 53 aa2.83□□□□□ -1.96
CPA1YOR303W IRA1P18963 3092 aa2.81□□□□□ -1.96
CPA1YOR303W Q0017Q9ZZX8 53 aa2.81□□□□□ -1.96
CPA1YOR303W TEL1P38110 2787 aa2.8□□□□□ -1.96
CPA1YOR303W TOR1P35169 2470 aa2.77□□□□□ -1.97
CPA1YOR303W NUM1Q00402 2748 aa2.77□□□□□ -1.97
CPA1YOR303W TRA1P38811 3744 aa2.74□□□□□ -1.97
CPA1YOR303W YLR157W-EP0CF00 54 aa2.59□□□□□ -1.99
CPA1YOR303W YHR050W-AQ05451 56 aa2.58□□□□□ -2
CPA1YOR303W RPS29AP41057 56 aaKnown RBP2.49□□□□□ -2.01
CPA1YOR303W DYN1P36022 4092 aa2.37□□□□□ -2.03
CPA1YOR303W RPS29BP41058 56 aaKnown RBP2.36□□□□□ -2.03
CPA1YOR303W MDN1Q12019 4910 aaKnown RBP2.32□□□□□ -2.04
Retrieved 63 of 5,963 RNA–protein pairs in 18.8 ms