RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C TMC1Q08422 150 aaPredicted RBP2.77□□□□□ -1.97
VHS3YOR054C Q0032Q9ZZX7 96 aa2.77□□□□□ -1.97
VHS3YOR054C YCR041WP37265 110 aa2.76□□□□□ -1.97
VHS3YOR054C DDR2P89113 61 aa2.76□□□□□ -1.97
VHS3YOR054C YHR007C-AQ07074 71 aa2.76□□□□□ -1.97
VHS3YOR054C YGR240C-AQ3E786 66 aa2.76□□□□□ -1.97
VHS3YOR054C YJL197C-AP0C5P0 93 aa2.75□□□□□ -1.97
VHS3YOR054C RDS3Q06835 107 aaPredicted RBP2.75□□□□□ -1.97
VHS3YOR054C YOR072WQ08486 104 aa2.73□□□□□ -1.97
VHS3YOR054C RTC6O14464 93 aa2.73□□□□□ -1.97
VHS3YOR054C YGL014C-AP0C5N1 53 aa2.73□□□□□ -1.97
VHS3YOR054C SGF11Q03067 99 aa2.73□□□□□ -1.97
VHS3YOR054C RPL33AP05744 107 aaKnown RBP2.7□□□□□ -1.98
VHS3YOR054C RPL33BP41056 107 aaKnown RBP2.7□□□□□ -1.98
VHS3YOR054C GIS2P53849 153 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98 RIP-Chip
VHS3YOR054C YDL012CQ12489 107 aa2.69□□□□□ -1.98
VHS3YOR054C YDR115WQ04598 105 aa2.69□□□□□ -1.98
VHS3YOR054C YMR230W-AQ3E7B5 62 aa2.68□□□□□ -1.98
VHS3YOR054C YBL008W-AQ3E821 79 aa2.67□□□□□ -1.98
VHS3YOR054C YJR128WP47162 119 aa2.66□□□□□ -1.98
VHS3YOR054C YBR201C-AQ2V2Q3 67 aa2.66□□□□□ -1.98
VHS3YOR054C YHR212W-AP0CX91 67 aa2.64□□□□□ -1.99
VHS3YOR054C YLR255CO13574 117 aa2.63□□□□□ -1.99
VHS3YOR054C YGR146C-AQ8TGT9 53 aa2.63□□□□□ -1.99
VHS3YOR054C YGL041C-BQ3E750 60 aa2.63□□□□□ -1.99
VHS3YOR054C YLL066W-BQ8TGJ7 56 aa2.63□□□□□ -1.99
VHS3YOR054C YDR210WQ03482 75 aa2.61□□□□□ -1.99
VHS3YOR054C COX8P04039 78 aa2.6□□□□□ -1.99
VHS3YOR054C YOL097W-AQ3E7Y9 61 aa2.6□□□□□ -1.99
VHS3YOR054C YEL014CP39999 101 aa2.59□□□□□ -1.99
VHS3YOR054C MDN1Q12019 4910 aaKnown RBP2.59□□□□□ -1.99
VHS3YOR054C YER078W-AQ3E7A2 54 aa2.56□□□□□ -2
VHS3YOR054C RPL37BP51402 88 aaKnown RBP2.56□□□□□ -2
VHS3YOR054C CMC4Q3E7A9 73 aa2.55□□□□□ -2
VHS3YOR054C YOR316C-AQ3E806 69 aa2.55□□□□□ -2
VHS3YOR054C YHR073W-AP0C5N7 58 aa2.54□□□□□ -2
VHS3YOR054C YFL067WP43537 175 aa2.54□□□□□ -2
VHS3YOR054C YJR085CP47131 105 aaKnown RBP2.54□□□□□ -2
VHS3YOR054C YOR394C-AQ8TGJ0 55 aa2.54□□□□□ -2
VHS3YOR054C OLI1P61829 76 aa2.54□□□□□ -2
VHS3YOR054C YCR108CQ3E819 63 aa2.52□□□□□ -2.01
VHS3YOR054C YBL044WP38194 122 aa2.51□□□□□ -2.01
VHS3YOR054C YBR016WP38216 128 aa2.5□□□□□ -2.01
VHS3YOR054C YPR195CQ06594 109 aa2.49□□□□□ -2.01
VHS3YOR054C YJL144WP47009 104 aa2.47□□□□□ -2.01
VHS3YOR054C YDR034C-AP0C289 58 aa2.44□□□□□ -2.02
VHS3YOR054C COX7P10174 60 aa2.44□□□□□ -2.02
VHS3YOR054C YHR032W-AP0C5N6 59 aa2.39□□□□□ -2.03
VHS3YOR054C YAL067W-AQ8TGK6 75 aa2.35□□□□□ -2.03
VHS3YOR054C LCL1Q02786 101 aa2.34□□□□□ -2.03
VHS3YOR054C RPL37AP49166 88 aaKnown RBP2.3□□□□□ -2.04
VHS3YOR054C YBR072C-AQ3E794 53 aa2.29□□□□□ -2.04
VHS3YOR054C HHY1P39982 102 aa2.28□□□□□ -2.04
VHS3YOR054C YOR072W-BQ3E832 53 aa2.25□□□□□ -2.05
VHS3YOR054C YJL009WP47078 108 aa2.24□□□□□ -2.05
VHS3YOR054C YML054C-AQ3E809 52 aa2.08□□□□□ -2.08
VHS3YOR054C Q0017Q9ZZX8 53 aa2□□□□□ -2.09
VHS3YOR054C YOL164W-AQ3E7A5 60 aa2□□□□□ -2.09
VHS3YOR054C YHR086W-AQ3E746 53 aa1.83□□□□□ -2.12
VHS3YOR054C YHR050W-AQ05451 56 aa1.75□□□□□ -2.13
VHS3YOR054C YLR157W-EP0CF00 54 aa1.68□□□□□ -2.14
VHS3YOR054C RPS29AP41057 56 aaKnown RBP1.65□□□□□ -2.15
VHS3YOR054C RPS29BP41058 56 aaKnown RBP1.62□□□□□ -2.15
Retrieved 63 of 5,963 RNA–protein pairs in 6.8 ms