RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W YOR314WQ12506 109 aa2.29□□□□□ -2.04
RRP40YOL142W YDR246W-AQ3E763 66 aa2.29□□□□□ -2.04
RRP40YOL142W RUB1Q03919 77 aa2.28□□□□□ -2.04
RRP40YOL142W YDR119W-AQ2V2P9 66 aa2.28□□□□□ -2.04
RRP40YOL142W YGR039WP53225 103 aa2.27□□□□□ -2.05
RRP40YOL142W NOP10Q6Q547 58 aaPredicted RBP2.27□□□□□ -2.05
RRP40YOL142W FYV12Q08559 129 aa2.26□□□□□ -2.05
RRP40YOL142W Q0017Q9ZZX8 53 aa2.26□□□□□ -2.05
RRP40YOL142W YLR255CO13574 117 aa2.25□□□□□ -2.05
RRP40YOL142W YBR121C-AP0C5L4 52 aa2.25□□□□□ -2.05
RRP40YOL142W YIL102CP40488 101 aa2.25□□□□□ -2.05
RRP40YOL142W YPL038W-AQ3E7B4 63 aa2.25□□□□□ -2.05
RRP40YOL142W YOL166W-AQ8TGJ1 51 aa2.25□□□□□ -2.05
RRP40YOL142W YBR016WP38216 128 aa2.24□□□□□ -2.05
RRP40YOL142W YGR146C-AQ8TGT9 53 aa2.23□□□□□ -2.05
RRP40YOL142W YJL009WP47078 108 aa2.22□□□□□ -2.05
RRP40YOL142W COX8P04039 78 aa2.21□□□□□ -2.06
RRP40YOL142W YKL065W-AQ2V2P2 73 aa2.2□□□□□ -2.06
RRP40YOL142W YDR182W-AQ3E796 67 aa2.2□□□□□ -2.06
RRP40YOL142W AIM4P38305 123 aaPredicted RBP2.19□□□□□ -2.06
RRP40YOL142W YDR210WQ03482 75 aa2.19□□□□□ -2.06
RRP40YOL142W RPS28BP0C0X0 67 aaKnown RBP2.18□□□□□ -2.06
RRP40YOL142W RPS28AQ3E7X9 67 aaPredicted RBP2.18□□□□□ -2.06
RRP40YOL142W TOM6P33448 61 aa2.15□□□□□ -2.07
RRP40YOL142W OLI1P61829 76 aa2.15□□□□□ -2.07
RRP40YOL142W YFR032C-BQ8TGU2 87 aa2.15□□□□□ -2.07
RRP40YOL142W RPS30AP0CX33 63 aaKnown RBP2.13□□□□□ -2.07
RRP40YOL142W RPS30BP0CX34 63 aaKnown RBP2.13□□□□□ -2.07
RRP40YOL142W YIL156W-BQ2V2P4 73 aa2.13□□□□□ -2.07
RRP40YOL142W SDH6Q3E785 79 aa2.11□□□□□ -2.07
RRP40YOL142W MRX7P53869 86 aa2.09□□□□□ -2.07
RRP40YOL142W YBR201C-AQ2V2Q3 67 aa2.09□□□□□ -2.07
RRP40YOL142W YIR021W-AQ3E739 70 aa2.09□□□□□ -2.07
RRP40YOL142W OST5Q92316 86 aa2.08□□□□□ -2.08
RRP40YOL142W YBL044WP38194 122 aa2.07□□□□□ -2.08
RRP40YOL142W YMR001C-AQ8TGS9 76 aa2.07□□□□□ -2.08
RRP40YOL142W YML054C-AQ3E809 52 aa2.06□□□□□ -2.08
RRP40YOL142W HUB1Q6Q546 73 aa2.03□□□□□ -2.08
RRP40YOL142W YNL277W-AQ3E7Z0 62 aa2□□□□□ -2.09
RRP40YOL142W YLR412C-AQ3E742 68 aa1.98□□□□□ -2.09
RRP40YOL142W YOR394C-AQ8TGJ0 55 aa1.97□□□□□ -2.09
RRP40YOL142W SBH1P52870 82 aa1.96□□□□□ -2.1
RRP40YOL142W YMR122CQ03879 124 aa1.95□□□□□ -2.1
RRP40YOL142W RPL37AP49166 88 aaKnown RBP1.94□□□□□ -2.1
RRP40YOL142W ATP17Q06405 101 aa1.94□□□□□ -2.1
RRP40YOL142W YOR381W-AQ3E804 55 aa1.92□□□□□ -2.1
RRP40YOL142W YML100W-AQ8TGT0 57 aa1.91□□□□□ -2.1
RRP40YOL142W RPS29BP41058 56 aaKnown RBP1.9□□□□□ -2.11
RRP40YOL142W YER188C-AP0C0V2 99 aa1.88□□□□□ -2.11
RRP40YOL142W YCR095W-AQ3E787 52 aa1.88□□□□□ -2.11
RRP40YOL142W RPS29AP41057 56 aaKnown RBP1.87□□□□□ -2.11
RRP40YOL142W YCR108CQ3E819 63 aa1.87□□□□□ -2.11
RRP40YOL142W QCR10P37299 77 aa1.8□□□□□ -2.12
RRP40YOL142W YEL014CP39999 101 aa1.8□□□□□ -2.12
RRP40YOL142W YOR376W-AQ3E805 51 aa1.8□□□□□ -2.12
RRP40YOL142W SOM1Q05676 74 aa1.79□□□□□ -2.12
RRP40YOL142W YOR072W-BQ3E832 53 aa1.77□□□□□ -2.13
RRP40YOL142W YGL014C-AP0C5N1 53 aa1.65□□□□□ -2.15
RRP40YOL142W HHY1P39982 102 aa1.65□□□□□ -2.15
RRP40YOL142W YBR072C-AQ3E794 53 aa1.57□□□□□ -2.16
RRP40YOL142W YHR050W-AQ05451 56 aa1.46□□□□□ -2.18
RRP40YOL142W YOL164W-AQ3E7A5 60 aa1.19□□□□□ -2.22
RRP40YOL142W YLR157W-EP0CF00 54 aa1.16□□□□□ -2.22
Retrieved 63 of 5,963 RNA–protein pairs in 11.9 ms