RNA–Protein interactions for RNA: YOL113W

SKM1, Transcript of Member of the PAK family of serine/threonine protein kinases, yeastyeast

Gene SKM1, Length 1,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKM1YOL113W YOR394C-AQ8TGJ0 55 aa2.22□□□□□ -2.05
SKM1YOL113W YFR009W-AP0C5M9 85 aa2.19□□□□□ -2.06
SKM1YOL113W SIP18P50263 79 aa2.17□□□□□ -2.06
SKM1YOL113W YLL006W-AQ3E814 58 aa2.17□□□□□ -2.06
SKM1YOL113W YMR105W-AQ8TGS8 64 aa2.16□□□□□ -2.06
SKM1YOL113W YDR524C-BQ3E6R4 66 aa2.16□□□□□ -2.06
SKM1YOL113W YPR010C-AA5Z2X5 72 aa2.15□□□□□ -2.07
SKM1YOL113W YGR025WP53216 100 aa2.14□□□□□ -2.07
SKM1YOL113W YIL046W-AQ3E7Z4 54 aa2.14□□□□□ -2.07
SKM1YOL113W RPL29P05747 59 aaPredicted RBP2.13□□□□□ -2.07
SKM1YOL113W RPL39P04650 51 aa2.11□□□□□ -2.07
SKM1YOL113W RPL43AP0CX25 92 aaKnown RBP2.11□□□□□ -2.07
SKM1YOL113W RPL43BP0CX26 92 aa2.11□□□□□ -2.07
SKM1YOL113W PMP3P87284 55 aa2.11□□□□□ -2.07
SKM1YOL113W OLI1P61829 76 aa2.09□□□□□ -2.07
SKM1YOL113W YJL133C-AQ3E7A3 74 aa2.09□□□□□ -2.07
SKM1YOL113W YLR307C-AQ3E825 87 aa2.08□□□□□ -2.08
SKM1YOL113W YBR230W-AQ3E762 66 aa2.06□□□□□ -2.08
SKM1YOL113W YJL127C-BQ3E828 52 aa2.06□□□□□ -2.08
SKM1YOL113W YLR157W-EP0CF00 54 aa2.03□□□□□ -2.08
SKM1YOL113W HOR7Q05827 59 aa2.03□□□□□ -2.08
SKM1YOL113W YOL164W-AQ3E7A5 60 aa2.03□□□□□ -2.08
SKM1YOL113W IRA2P19158 3079 aa2.03□□□□□ -2.09
SKM1YOL113W DDR2P89113 61 aa2.02□□□□□ -2.09
SKM1YOL113W YBR016WP38216 128 aa2.01□□□□□ -2.09
SKM1YOL113W RPL37AP49166 88 aaKnown RBP2□□□□□ -2.09
SKM1YOL113W YCR108CQ3E819 63 aa1.99□□□□□ -2.09
SKM1YOL113W TOM1Q03280 3268 aa1.98□□□□□ -2.09
SKM1YOL113W YBL044WP38194 122 aa1.98□□□□□ -2.09
SKM1YOL113W YGR146C-AQ8TGT9 53 aa1.93□□□□□ -2.1
SKM1YOL113W VPS13Q07878 3144 aa1.92□□□□□ -2.1
SKM1YOL113W CSF1Q12150 2958 aa1.92□□□□□ -2.1
SKM1YOL113W RPL37BP51402 88 aaKnown RBP1.89□□□□□ -2.11
SKM1YOL113W TAO3P40468 2376 aa1.89□□□□□ -2.11
SKM1YOL113W GCN1P33892 2672 aaKnown RBP1.88□□□□□ -2.11
SKM1YOL113W YLL066W-BQ8TGJ7 56 aa1.87□□□□□ -2.11
SKM1YOL113W YHR073W-AP0C5N7 58 aa1.86□□□□□ -2.11
SKM1YOL113W YOR316C-AQ3E806 69 aa1.85□□□□□ -2.11
SKM1YOL113W TRA1P38811 3744 aa1.83□□□□□ -2.12
SKM1YOL113W PRP8P33334 2413 aaKnown RBP1.83□□□□□ -2.12
SKM1YOL113W MEC1P38111 2368 aa1.81□□□□□ -2.12
SKM1YOL113W IRA1P18963 3092 aa1.79□□□□□ -2.12
SKM1YOL113W UTP20P35194 2493 aaKnown RBP1.78□□□□□ -2.12
SKM1YOL113W FMP27Q06179 2628 aa1.78□□□□□ -2.12
SKM1YOL113W Q0297Q9ZZV8 51 aa1.75□□□□□ -2.13
SKM1YOL113W YDR034W-BQ6Q5X2 51 aa1.73□□□□□ -2.13
SKM1YOL113W YDR034C-AP0C289 58 aa1.71□□□□□ -2.14
SKM1YOL113W YPR117WQ06116 2489 aa1.71□□□□□ -2.14
SKM1YOL113W NUM1Q00402 2748 aa1.69□□□□□ -2.14
SKM1YOL113W YOR072W-BQ3E832 53 aa1.67□□□□□ -2.14
SKM1YOL113W RPS29BP41058 56 aaKnown RBP1.63□□□□□ -2.15
SKM1YOL113W TOR2P32600 2474 aaKnown RBP1.62□□□□□ -2.15
SKM1YOL113W CUP1-1P0CX80 61 aa1.62□□□□□ -2.15
SKM1YOL113W CUP1-2P0CX81 61 aa1.62□□□□□ -2.15
SKM1YOL113W YBR056W-AI2HB52 66 aa1.61□□□□□ -2.15
SKM1YOL113W TOR1P35169 2470 aa1.59□□□□□ -2.15
SKM1YOL113W TEL1P38110 2787 aa1.58□□□□□ -2.16
SKM1YOL113W YML054C-AQ3E809 52 aa1.53□□□□□ -2.16
SKM1YOL113W DYN1P36022 4092 aa1.46□□□□□ -2.18
SKM1YOL113W Q0017Q9ZZX8 53 aa1.45□□□□□ -2.18
SKM1YOL113W RPS29AP41057 56 aaKnown RBP1.35□□□□□ -2.19
SKM1YOL113W YHR050W-AQ05451 56 aa1.3□□□□□ -2.2
SKM1YOL113W MDN1Q12019 4910 aaKnown RBP1.26□□□□□ -2.21
Retrieved 63 of 5,963 RNA–protein pairs in 67.1 ms