RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C SPI1P40092 148 aa1.44□□□□□ -2.18
HRD1YOL013C YNL190WP53872 204 aa1.43□□□□□ -2.18
HRD1YOL013C YLR342W-AQ3E810 57 aa1.43□□□□□ -2.18
HRD1YOL013C PAU7P39545 55 aa1.42□□□□□ -2.18
HRD1YOL013C YBR200W-AQ3E755 54 aa1.42□□□□□ -2.18
HRD1YOL013C YNL198CP40166 100 aa1.42□□□□□ -2.18
HRD1YOL013C ERI1P62651 68 aaKnown RBP1.41□□□□□ -2.18
HRD1YOL013C UTP20P35194 2493 aaKnown RBP1.41□□□□□ -2.18
HRD1YOL013C ATP18P81450 59 aa1.4□□□□□ -2.19
HRD1YOL013C RPC10P40422 70 aa1.39□□□□□ -2.19
HRD1YOL013C YDR246W-AQ3E763 66 aa1.39□□□□□ -2.19
HRD1YOL013C COX7P10174 60 aa1.39□□□□□ -2.19
HRD1YOL013C YBR072C-AQ3E794 53 aa1.39□□□□□ -2.19
HRD1YOL013C SGF11Q03067 99 aa1.38□□□□□ -2.19
HRD1YOL013C TOS6P48560 102 aa1.37□□□□□ -2.19
HRD1YOL013C YOR008C-AQ3E7B9 74 aa1.37□□□□□ -2.19
HRD1YOL013C YLR307C-AQ3E825 87 aa1.35□□□□□ -2.19
HRD1YOL013C YLR157W-EP0CF00 54 aa1.35□□□□□ -2.19
HRD1YOL013C PMP3P87284 55 aa1.35□□□□□ -2.19
HRD1YOL013C YLL066W-BQ8TGJ7 56 aa1.34□□□□□ -2.19
HRD1YOL013C ATP17Q06405 101 aa1.33□□□□□ -2.2
HRD1YOL013C YIL102C-AQ2V2P5 75 aa1.33□□□□□ -2.2
HRD1YOL013C YLL006W-AQ3E814 58 aa1.33□□□□□ -2.2
HRD1YOL013C RPL38P49167 78 aaKnown RBP1.32□□□□□ -2.2
HRD1YOL013C MDN1Q12019 4910 aaKnown RBP1.32□□□□□ -2.2
HRD1YOL013C EDC1P53080 175 aaPredicted RBP1.32□□□□□ -2.2
HRD1YOL013C SDH6Q3E785 79 aa1.32□□□□□ -2.2
HRD1YOL013C YSY6P38374 65 aa1.31□□□□□ -2.2
HRD1YOL013C YOL097W-AQ3E7Y9 61 aa1.31□□□□□ -2.2
HRD1YOL013C RPL37BP51402 88 aaKnown RBP1.3□□□□□ -2.2
HRD1YOL013C YJR107C-AP0CT86 78 aa1.29□□□□□ -2.2
HRD1YOL013C YKL023C-AQ2V2P3 75 aa1.29□□□□□ -2.2
HRD1YOL013C YOL164W-AQ3E7A5 60 aa1.28□□□□□ -2.2
HRD1YOL013C YDR034C-AP0C289 58 aa1.27□□□□□ -2.21
HRD1YOL013C YBR230W-AQ3E762 66 aa1.26□□□□□ -2.21
HRD1YOL013C YBL039W-BP0C268 59 aa1.26□□□□□ -2.21
HRD1YOL013C YFR009W-AP0C5M9 85 aa1.26□□□□□ -2.21
HRD1YOL013C RPS30AP0CX33 63 aaKnown RBP1.25□□□□□ -2.21
HRD1YOL013C RPS30BP0CX34 63 aaKnown RBP1.25□□□□□ -2.21
HRD1YOL013C YJL127C-BQ3E828 52 aa1.25□□□□□ -2.21
HRD1YOL013C RPL29P05747 59 aaPredicted RBP1.24□□□□□ -2.21
HRD1YOL013C YPR010C-AA5Z2X5 72 aa1.23□□□□□ -2.21
HRD1YOL013C DDR2P89113 61 aa1.23□□□□□ -2.21
HRD1YOL013C YDR182W-AQ3E796 67 aa1.22□□□□□ -2.21
HRD1YOL013C YJL133C-AQ3E7A3 74 aa1.21□□□□□ -2.22
HRD1YOL013C YOL166W-AQ8TGJ1 51 aa1.2□□□□□ -2.22
HRD1YOL013C HUB1Q6Q546 73 aa1.19□□□□□ -2.22
HRD1YOL013C YBR016WP38216 128 aa1.18□□□□□ -2.22
HRD1YOL013C YLR157W-DP0CE99 70 aa1.12□□□□□ -2.23
HRD1YOL013C YOR394C-AQ8TGJ0 55 aa1.12□□□□□ -2.23
HRD1YOL013C YOR316C-AQ3E806 69 aa1.1□□□□□ -2.23
HRD1YOL013C YMR001C-AQ8TGS9 76 aa1.09□□□□□ -2.24
HRD1YOL013C YHR073W-AP0C5N7 58 aa1.07□□□□□ -2.24
HRD1YOL013C YBL044WP38194 122 aa1.07□□□□□ -2.24
HRD1YOL013C YGR146C-AQ8TGT9 53 aa1.05□□□□□ -2.24
HRD1YOL013C OLI1P61829 76 aa1.04□□□□□ -2.24
HRD1YOL013C RPS29BP41058 56 aaKnown RBP1.03□□□□□ -2.24
HRD1YOL013C YCR108CQ3E819 63 aa0.97□□□□□ -2.25
HRD1YOL013C Q0017Q9ZZX8 53 aa0.91□□□□□ -2.26
HRD1YOL013C YML054C-AQ3E809 52 aa0.86□□□□□ -2.27
HRD1YOL013C YOR072W-BQ3E832 53 aa0.81□□□□□ -2.28
HRD1YOL013C RPS29AP41057 56 aaKnown RBP0.69□□□□□ -2.3
HRD1YOL013C YHR050W-AQ05451 56 aa0.65□□□□□ -2.31
Retrieved 63 of 5,963 RNA–protein pairs in 8.7 ms