RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeastyeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP1YOL006C SMX2P40204 77 aaKnown RBP1.69□□□□□ -2.14
TOP1YOL006C IRA2P19158 3079 aa1.68□□□□□ -2.14
TOP1YOL006C YLR157W-DP0CE99 70 aa1.68□□□□□ -2.14
TOP1YOL006C IRA1P18963 3092 aa1.68□□□□□ -2.14
TOP1YOL006C YBR200W-AQ3E755 54 aa1.67□□□□□ -2.14
TOP1YOL006C YOR011W-AQ3E807 68 aa1.66□□□□□ -2.14
TOP1YOL006C MDN1Q12019 4910 aaKnown RBP1.65□□□□□ -2.15
TOP1YOL006C MEC1P38111 2368 aa1.63□□□□□ -2.15
TOP1YOL006C RPL43AP0CX25 92 aaKnown RBP1.62□□□□□ -2.15
TOP1YOL006C RPL43BP0CX26 92 aa1.62□□□□□ -2.15
TOP1YOL006C YOR394C-AQ8TGJ0 55 aa1.62□□□□□ -2.15
TOP1YOL006C RPS27AP35997 82 aaKnown RBP1.59□□□□□ -2.15
TOP1YOL006C FLO1P32768 1537 aa1.59□□□□□ -2.16
TOP1YOL006C OLI1P61829 76 aa1.58□□□□□ -2.16
TOP1YOL006C YGR025WP53216 100 aa1.57□□□□□ -2.16
TOP1YOL006C CSF1Q12150 2958 aa1.55□□□□□ -2.16
TOP1YOL006C YLR157W-EP0CF00 54 aa1.55□□□□□ -2.16
TOP1YOL006C YLR307C-AQ3E825 87 aa1.54□□□□□ -2.16
TOP1YOL006C YOL164W-AQ3E7A5 60 aa1.54□□□□□ -2.16
TOP1YOL006C DYN1P36022 4092 aa1.53□□□□□ -2.16
TOP1YOL006C YPR010C-AA5Z2X5 72 aa1.53□□□□□ -2.16
TOP1YOL006C RPL37AP49166 88 aaKnown RBP1.53□□□□□ -2.16
TOP1YOL006C YBR230W-AQ3E762 66 aa1.53□□□□□ -2.16
TOP1YOL006C YBR016WP38216 128 aa1.49□□□□□ -2.17
TOP1YOL006C YFR009W-AP0C5M9 85 aa1.48□□□□□ -2.17
TOP1YOL006C TRA1P38811 3744 aa1.47□□□□□ -2.17
TOP1YOL006C RPS27BP38711 82 aa1.47□□□□□ -2.17
TOP1YOL006C YDR524C-BQ3E6R4 66 aa1.46□□□□□ -2.18
TOP1YOL006C YBL044WP38194 122 aa1.45□□□□□ -2.18
TOP1YOL006C TOS6P48560 102 aa1.45□□□□□ -2.18
TOP1YOL006C SIP18P50263 79 aa1.44□□□□□ -2.18
TOP1YOL006C YCR108CQ3E819 63 aa1.42□□□□□ -2.18
TOP1YOL006C RPL37BP51402 88 aaKnown RBP1.41□□□□□ -2.18
TOP1YOL006C YGR146C-AQ8TGT9 53 aa1.39□□□□□ -2.19
TOP1YOL006C YOR008C-AQ3E7B9 74 aa1.34□□□□□ -2.2
TOP1YOL006C YBR056W-AI2HB52 66 aa1.32□□□□□ -2.2
TOP1YOL006C YLR342W-AQ3E810 57 aa1.32□□□□□ -2.2
TOP1YOL006C COA2Q3E823 68 aa1.32□□□□□ -2.2
TOP1YOL006C YIL046W-AQ3E7Z4 54 aa1.31□□□□□ -2.2
TOP1YOL006C YJL133C-AQ3E7A3 74 aa1.29□□□□□ -2.2
TOP1YOL006C RPS29BP41058 56 aaKnown RBP1.28□□□□□ -2.2
TOP1YOL006C COX9P07255 59 aa1.27□□□□□ -2.21
TOP1YOL006C DDR2P89113 61 aa1.22□□□□□ -2.21
TOP1YOL006C YOR072W-BQ3E832 53 aa1.2□□□□□ -2.22
TOP1YOL006C TOM7P53507 60 aa1.2□□□□□ -2.22
TOP1YOL006C YLL006W-AQ3E814 58 aa1.2□□□□□ -2.22
TOP1YOL006C YOR316C-AQ3E806 69 aa1.19□□□□□ -2.22
TOP1YOL006C YGL258W-AQ3E740 77 aa1.17□□□□□ -2.22
TOP1YOL006C RPL29P05747 59 aaPredicted RBP1.12□□□□□ -2.23
TOP1YOL006C YJL127C-BQ3E828 52 aa1.1□□□□□ -2.23
TOP1YOL006C YDR034C-AP0C289 58 aa1.04□□□□□ -2.24
TOP1YOL006C RPS29AP41057 56 aaKnown RBP1.04□□□□□ -2.24
TOP1YOL006C YHR073W-AP0C5N7 58 aa1.01□□□□□ -2.25
TOP1YOL006C Q0297Q9ZZV8 51 aa0.98□□□□□ -2.25
TOP1YOL006C PMP3P87284 55 aa0.9□□□□□ -2.27
TOP1YOL006C HOR7Q05827 59 aa0.88□□□□□ -2.27
TOP1YOL006C NCE101Q02820 53 aa0.86□□□□□ -2.27
TOP1YOL006C YHR050W-AQ05451 56 aa0.86□□□□□ -2.27
TOP1YOL006C YML054C-AQ3E809 52 aa0.78□□□□□ -2.28
TOP1YOL006C Q0017Q9ZZX8 53 aa0.77□□□□□ -2.29
TOP1YOL006C RPL39P04650 51 aa0.75□□□□□ -2.29
TOP1YOL006C YMR105W-AQ8TGS8 64 aa0.74□□□□□ -2.29
TOP1YOL006C YLL066W-BQ8TGJ7 56 aa0.63□□□□□ -2.31
Retrieved 63 of 5,963 RNA–protein pairs in 7.3 ms