RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W COX7P10174 60 aa1.65□□□□□ -2.14
VPS27YNR006W PAU7P39545 55 aa1.65□□□□□ -2.14
VPS27YNR006W YOR011W-AQ3E807 68 aa1.65□□□□□ -2.14
VPS27YNR006W YLR342W-AQ3E810 57 aa1.64□□□□□ -2.15
VPS27YNR006W YLR157W-EP0CF00 54 aa1.63□□□□□ -2.15
VPS27YNR006W YLR307C-AQ3E825 87 aa1.63□□□□□ -2.15
VPS27YNR006W HOR7Q05827 59 aa1.63□□□□□ -2.15
VPS27YNR006W MEC1P38111 2368 aa1.62□□□□□ -2.15
VPS27YNR006W SPI1P40092 148 aa1.62□□□□□ -2.15
VPS27YNR006W UTP20P35194 2493 aaKnown RBP1.61□□□□□ -2.15
VPS27YNR006W YNL198CP40166 100 aa1.61□□□□□ -2.15
VPS27YNR006W ERI1P62651 68 aaKnown RBP1.61□□□□□ -2.15
VPS27YNR006W YBR200W-AQ3E755 54 aa1.61□□□□□ -2.15
VPS27YNR006W RPL38P49167 78 aaKnown RBP1.6□□□□□ -2.15
VPS27YNR006W SDH6Q3E785 79 aa1.59□□□□□ -2.15
VPS27YNR006W YJR107C-AP0CT86 78 aa1.58□□□□□ -2.16
VPS27YNR006W TOS6P48560 102 aa1.58□□□□□ -2.16
VPS27YNR006W YNL190WP53872 204 aa1.58□□□□□ -2.16
VPS27YNR006W YOR008C-AQ3E7B9 74 aa1.58□□□□□ -2.16
VPS27YNR006W YIL102C-AQ2V2P5 75 aa1.57□□□□□ -2.16
VPS27YNR006W RPL37BP51402 88 aaKnown RBP1.56□□□□□ -2.16
VPS27YNR006W YOL164W-AQ3E7A5 60 aa1.56□□□□□ -2.16
VPS27YNR006W ATP17Q06405 101 aa1.56□□□□□ -2.16
VPS27YNR006W YOL097W-AQ3E7Y9 61 aa1.56□□□□□ -2.16
VPS27YNR006W PMP3P87284 55 aa1.55□□□□□ -2.16
VPS27YNR006W YDR246W-AQ3E763 66 aa1.54□□□□□ -2.16
VPS27YNR006W YKL023C-AQ2V2P3 75 aa1.53□□□□□ -2.16
VPS27YNR006W YSY6P38374 65 aa1.52□□□□□ -2.17
VPS27YNR006W DYN1P36022 4092 aa1.52□□□□□ -2.17
VPS27YNR006W YLL006W-AQ3E814 58 aa1.52□□□□□ -2.17
VPS27YNR006W YLL066W-BQ8TGJ7 56 aa1.48□□□□□ -2.17
VPS27YNR006W EDC1P53080 175 aaPredicted RBP1.48□□□□□ -2.17
VPS27YNR006W YBL039W-BP0C268 59 aa1.46□□□□□ -2.18
VPS27YNR006W RPS30AP0CX33 63 aaKnown RBP1.45□□□□□ -2.18
VPS27YNR006W RPS30BP0CX34 63 aaKnown RBP1.45□□□□□ -2.18
VPS27YNR006W YPR010C-AA5Z2X5 72 aa1.44□□□□□ -2.18
VPS27YNR006W RPL29P05747 59 aaPredicted RBP1.44□□□□□ -2.18
VPS27YNR006W YFR009W-AP0C5M9 85 aa1.44□□□□□ -2.18
VPS27YNR006W YBR230W-AQ3E762 66 aa1.44□□□□□ -2.18
VPS27YNR006W YJL127C-BQ3E828 52 aa1.43□□□□□ -2.18
VPS27YNR006W YDR034C-AP0C289 58 aa1.41□□□□□ -2.18
VPS27YNR006W HUB1Q6Q546 73 aa1.41□□□□□ -2.18
VPS27YNR006W DDR2P89113 61 aa1.41□□□□□ -2.18
VPS27YNR006W YDR182W-AQ3E796 67 aa1.41□□□□□ -2.18
VPS27YNR006W YJL133C-AQ3E7A3 74 aa1.4□□□□□ -2.19
VPS27YNR006W YBR016WP38216 128 aa1.39□□□□□ -2.19
VPS27YNR006W YOL166W-AQ8TGJ1 51 aa1.35□□□□□ -2.19
VPS27YNR006W YLR157W-DP0CE99 70 aa1.31□□□□□ -2.2
VPS27YNR006W YOR394C-AQ8TGJ0 55 aa1.31□□□□□ -2.2
VPS27YNR006W MDN1Q12019 4910 aaKnown RBP1.28□□□□□ -2.2
VPS27YNR006W OLI1P61829 76 aa1.28□□□□□ -2.2
VPS27YNR006W YMR001C-AQ8TGS9 76 aa1.28□□□□□ -2.2
VPS27YNR006W RPS29BP41058 56 aaKnown RBP1.27□□□□□ -2.21
VPS27YNR006W YOR316C-AQ3E806 69 aa1.26□□□□□ -2.21
VPS27YNR006W YHR073W-AP0C5N7 58 aa1.26□□□□□ -2.21
VPS27YNR006W YBL044WP38194 122 aa1.25□□□□□ -2.21
VPS27YNR006W YGR146C-AQ8TGT9 53 aa1.24□□□□□ -2.21
VPS27YNR006W YCR108CQ3E819 63 aa1.14□□□□□ -2.23
VPS27YNR006W Q0017Q9ZZX8 53 aa1.09□□□□□ -2.24
VPS27YNR006W YML054C-AQ3E809 52 aa1.05□□□□□ -2.24
VPS27YNR006W YOR072W-BQ3E832 53 aa1.01□□□□□ -2.25
VPS27YNR006W RPS29AP41057 56 aaKnown RBP0.81□□□□□ -2.28
VPS27YNR006W YHR050W-AQ05451 56 aa0.8□□□□□ -2.28
Retrieved 63 of 5,963 RNA–protein pairs in 76.2 ms