RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W HHF1P02309 103 aaKnown RBP3.46□□□□□ -1.86
ATG4YNL223W YHR125WP38831 101 aa3.46□□□□□ -1.86
ATG4YNL223W RPS30AP0CX33 63 aaKnown RBP3.43□□□□□ -1.86
ATG4YNL223W RPS30BP0CX34 63 aaKnown RBP3.43□□□□□ -1.86
ATG4YNL223W CMC4Q3E7A9 73 aa3.42□□□□□ -1.86
ATG4YNL223W YLR255CO13574 117 aa3.41□□□□□ -1.86
ATG4YNL223W YGR146C-AQ8TGT9 53 aa3.41□□□□□ -1.86
ATG4YNL223W YIR021W-AQ3E739 70 aa3.39□□□□□ -1.87
ATG4YNL223W YJL144WP47009 104 aa3.38□□□□□ -1.87
ATG4YNL223W YKL065W-AQ2V2P2 73 aa3.38□□□□□ -1.87
ATG4YNL223W COX8P04039 78 aa3.37□□□□□ -1.87
ATG4YNL223W SDH6Q3E785 79 aa3.37□□□□□ -1.87
ATG4YNL223W YFR032C-BQ8TGU2 87 aa3.36□□□□□ -1.87
ATG4YNL223W YBR016WP38216 128 aa3.35□□□□□ -1.87
ATG4YNL223W RPL37BP51402 88 aaKnown RBP3.33□□□□□ -1.88
ATG4YNL223W YBL008W-AQ3E821 79 aa3.33□□□□□ -1.88
ATG4YNL223W YMR001C-AQ8TGS9 76 aa3.33□□□□□ -1.88
ATG4YNL223W OST5Q92316 86 aa3.3□□□□□ -1.88
ATG4YNL223W OLI1P61829 76 aa3.28□□□□□ -1.88
ATG4YNL223W YBR201C-AQ2V2Q3 67 aa3.28□□□□□ -1.88
ATG4YNL223W HUB1Q6Q546 73 aa3.28□□□□□ -1.88
ATG4YNL223W YIL156W-BQ2V2P4 73 aa3.27□□□□□ -1.89
ATG4YNL223W YER175W-AQ8TGU4 54 aa3.27□□□□□ -1.89
ATG4YNL223W YMR122CQ03879 124 aa3.24□□□□□ -1.89
ATG4YNL223W YOR381W-AQ3E804 55 aa3.24□□□□□ -1.89
ATG4YNL223W MRX7P53869 86 aa3.23□□□□□ -1.89
ATG4YNL223W FYV12Q08559 129 aa3.22□□□□□ -1.89
ATG4YNL223W Q0017Q9ZZX8 53 aa3.22□□□□□ -1.89
ATG4YNL223W SBH1P52870 82 aa3.2□□□□□ -1.9
ATG4YNL223W YER188C-AP0C0V2 99 aa3.17□□□□□ -1.9
ATG4YNL223W YJL009WP47078 108 aa3.16□□□□□ -1.9
ATG4YNL223W YGL034CP53186 121 aa3.15□□□□□ -1.91
ATG4YNL223W YCR095W-AQ3E787 52 aa3.14□□□□□ -1.91
ATG4YNL223W YBL044WP38194 122 aa3.09□□□□□ -1.92
ATG4YNL223W ATP17Q06405 101 aa3.07□□□□□ -1.92
ATG4YNL223W YDR210WQ03482 75 aa3.06□□□□□ -1.92
ATG4YNL223W YLR412C-AQ3E742 68 aa3.05□□□□□ -1.92
ATG4YNL223W YML054C-AQ3E809 52 aa3.05□□□□□ -1.92
ATG4YNL223W YOR394C-AQ8TGJ0 55 aa3.04□□□□□ -1.92
ATG4YNL223W YCR108CQ3E819 63 aa2.96□□□□□ -1.93
ATG4YNL223W YEL014CP39999 101 aa2.94□□□□□ -1.94
ATG4YNL223W RPL37AP49166 88 aaKnown RBP2.91□□□□□ -1.94
ATG4YNL223W YBR121C-AP0C5L4 52 aa2.9□□□□□ -1.94
ATG4YNL223W RPS28BP0C0X0 67 aaKnown RBP2.88□□□□□ -1.95
ATG4YNL223W RPS28AQ3E7X9 67 aaPredicted RBP2.88□□□□□ -1.95
ATG4YNL223W QCR10P37299 77 aa2.87□□□□□ -1.95
ATG4YNL223W YNL277W-AQ3E7Z0 62 aa2.85□□□□□ -1.95
ATG4YNL223W YGL014C-AP0C5N1 53 aa2.8□□□□□ -1.96
ATG4YNL223W YOR072W-BQ3E832 53 aa2.78□□□□□ -1.96
ATG4YNL223W YML100W-AQ8TGT0 57 aa2.73□□□□□ -1.97
ATG4YNL223W YOR376W-AQ3E805 51 aa2.71□□□□□ -1.98
ATG4YNL223W SOM1Q05676 74 aa2.7□□□□□ -1.98
ATG4YNL223W HHY1P39982 102 aa2.65□□□□□ -1.99
ATG4YNL223W RPS29BP41058 56 aaKnown RBP2.6□□□□□ -1.99
ATG4YNL223W YER078W-AQ3E7A2 54 aa2.59□□□□□ -1.99
ATG4YNL223W YBR072C-AQ3E794 53 aa2.58□□□□□ -2
ATG4YNL223W RPS29AP41057 56 aaKnown RBP2.49□□□□□ -2.01
ATG4YNL223W YAL067W-AQ8TGK6 75 aa2.39□□□□□ -2.03
ATG4YNL223W YHR050W-AQ05451 56 aa2.26□□□□□ -2.05
ATG4YNL223W YHR032W-AP0C5N6 59 aa2.14□□□□□ -2.07
ATG4YNL223W YOL164W-AQ3E7A5 60 aa1.97□□□□□ -2.09
ATG4YNL223W YHR086W-AQ3E746 53 aa1.86□□□□□ -2.11
ATG4YNL223W YLR157W-EP0CF00 54 aa1.82□□□□□ -2.12
Retrieved 63 of 5,963 RNA–protein pairs in 9.7 ms