RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	YDR182W-A	Q3E796	67 aa		2.09	□□□□□ -2.07
TPM1	YNL079C	RPL36A	P05745	100 aa	Predicted RBP	2.08	□□□□□ -2.08
TPM1	YNL079C	YOL013W-A	P0C272	63 aa	Predicted RBP	2.08	□□□□□ -2.08
TPM1	YNL079C	YIL102C	P40488	101 aa		2.08	□□□□□ -2.08
TPM1	YNL079C	LIP1	Q03579	150 aa		2.08	□□□□□ -2.08
TPM1	YNL079C	YOL166W-A	Q8TGJ1	51 aa		2.07	□□□□□ -2.08
TPM1	YNL079C	YPR153W	Q06537	140 aa		2.06	□□□□□ -2.08
TPM1	YNL079C	YHL005C	P38752	130 aa		2.04	□□□□□ -2.08
TPM1	YNL079C	YKL065W-A	Q2V2P2	73 aa		2.04	□□□□□ -2.08
TPM1	YNL079C	YHR073W-A	P0C5N7	58 aa		2.03	□□□□□ -2.08
TPM1	YNL079C	YHR032W-A	P0C5N6	59 aa		2.02	□□□□□ -2.09
TPM1	YNL079C	YHR125W	P38831	101 aa		2.02	□□□□□ -2.09
TPM1	YNL079C	YDR010C	Q12426	110 aa		2.02	□□□□□ -2.09
TPM1	YNL079C	RPS30A	P0CX33	63 aa	Known RBP	2.01	□□□□□ -2.09
TPM1	YNL079C	RPS30B	P0CX34	63 aa	Known RBP	2.01	□□□□□ -2.09
TPM1	YNL079C	COX7	P10174	60 aa		2	□□□□□ -2.09
TPM1	YNL079C	YJR128W	P47162	119 aa		2	□□□□□ -2.09
TPM1	YNL079C	YOR381W-A	Q3E804	55 aa		2	□□□□□ -2.09
TPM1	YNL079C	YOR316C-A	Q3E806	69 aa		2	□□□□□ -2.09
TPM1	YNL079C	YER188C-A	P0C0V2	99 aa		1.99	□□□□□ -2.09
TPM1	YNL079C	YMR122C	Q03879	124 aa		1.99	□□□□□ -2.09
TPM1	YNL079C	SDH6	Q3E785	79 aa		1.99	□□□□□ -2.09
TPM1	YNL079C	OST5	Q92316	86 aa		1.99	□□□□□ -2.09
TPM1	YNL079C	YHR086W-A	Q3E746	53 aa		1.97	□□□□□ -2.09
TPM1	YNL079C	YGR146C-A	Q8TGT9	53 aa		1.97	□□□□□ -2.09
TPM1	YNL079C	YLR255C	O13574	117 aa		1.96	□□□□□ -2.1
TPM1	YNL079C	YNL122C	P53921	115 aa	Predicted RBP	1.96	□□□□□ -2.1
TPM1	YNL079C	HUB1	Q6Q546	73 aa		1.96	□□□□□ -2.1
TPM1	YNL079C	YML100W-A	Q8TGT0	57 aa		1.96	□□□□□ -2.1
TPM1	YNL079C	YFR032C-B	Q8TGU2	87 aa		1.96	□□□□□ -2.1
TPM1	YNL079C	COX8	P04039	78 aa		1.95	□□□□□ -2.1
TPM1	YNL079C	YMR001C-A	Q8TGS9	76 aa		1.95	□□□□□ -2.1
TPM1	YNL079C	YBR016W	P38216	128 aa		1.92	□□□□□ -2.1
TPM1	YNL079C	CMC4	Q3E7A9	73 aa		1.92	□□□□□ -2.1
TPM1	YNL079C	YOR376W-A	Q3E805	51 aa		1.92	□□□□□ -2.1
TPM1	YNL079C	OLI1	P61829	76 aa		1.91	□□□□□ -2.1
TPM1	YNL079C	YBR201C-A	Q2V2Q3	67 aa		1.91	□□□□□ -2.1
TPM1	YNL079C	YCR095W-A	Q3E787	52 aa		1.91	□□□□□ -2.1
TPM1	YNL079C	MRX7	P53869	86 aa		1.89	□□□□□ -2.11
TPM1	YNL079C	YIL156W-B	Q2V2P4	73 aa		1.89	□□□□□ -2.11
TPM1	YNL079C	ATP17	Q06405	101 aa		1.88	□□□□□ -2.11
TPM1	YNL079C	RPL37B	P51402	88 aa	Known RBP	1.87	□□□□□ -2.11
TPM1	YNL079C	FYV12	Q08559	129 aa		1.84	□□□□□ -2.11
TPM1	YNL079C	QCR10	P37299	77 aa		1.83	□□□□□ -2.12
TPM1	YNL079C	Q0017	Q9ZZX8	53 aa		1.82	□□□□□ -2.12
TPM1	YNL079C	SOM1	Q05676	74 aa		1.8	□□□□□ -2.12
TPM1	YNL079C	YJL009W	P47078	108 aa		1.79	□□□□□ -2.12
TPM1	YNL079C	YGL014C-A	P0C5N1	53 aa		1.78	□□□□□ -2.12
TPM1	YNL079C	YBL044W	P38194	122 aa		1.77	□□□□□ -2.13
TPM1	YNL079C	YOR394C-A	Q8TGJ0	55 aa		1.77	□□□□□ -2.13
TPM1	YNL079C	YML054C-A	Q3E809	52 aa		1.75	□□□□□ -2.13
TPM1	YNL079C	YEL014C	P39999	101 aa		1.74	□□□□□ -2.13
TPM1	YNL079C	YCR108C	Q3E819	63 aa		1.73	□□□□□ -2.13
TPM1	YNL079C	YDR210W	Q03482	75 aa		1.72	□□□□□ -2.13
TPM1	YNL079C	RPL37A	P49166	88 aa	Known RBP	1.69	□□□□□ -2.14
TPM1	YNL079C	YOR072W-B	Q3E832	53 aa		1.63	□□□□□ -2.15
TPM1	YNL079C	HHY1	P39982	102 aa		1.56	□□□□□ -2.16
TPM1	YNL079C	YBR072C-A	Q3E794	53 aa		1.56	□□□□□ -2.16
TPM1	YNL079C	RPS29B	P41058	56 aa	Known RBP	1.45	□□□□□ -2.18
TPM1	YNL079C	RPS29A	P41057	56 aa	Known RBP	1.38	□□□□□ -2.19
TPM1	YNL079C	YHR050W-A	Q05451	56 aa		1.33	□□□□□ -2.2
TPM1	YNL079C	YOL164W-A	Q3E7A5	60 aa		1.25	□□□□□ -2.21
TPM1	YNL079C	YLR157W-E	P0CF00	54 aa		1.09	□□□□□ -2.23

Retrieved 63 of 5,963 RNA–protein pairs in 7.9 ms