RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C YPR153WQ06537 140 aa2.94□□□□□ -1.94
EAR1YMR171C YOL097W-AQ3E7Y9 61 aa2.94□□□□□ -1.94
EAR1YMR171C YHR125WP38831 101 aa2.93□□□□□ -1.94
EAR1YMR171C YMR122CQ03879 124 aa2.93□□□□□ -1.94
EAR1YMR171C YOR268CQ08734 132 aa2.93□□□□□ -1.94
EAR1YMR171C YBR027CP38220 110 aa2.92□□□□□ -1.94
EAR1YMR171C YPR195CQ06594 109 aa2.92□□□□□ -1.94
EAR1YMR171C OST5Q92316 86 aa2.91□□□□□ -1.94
EAR1YMR171C YMR001C-AQ8TGS9 76 aa2.9□□□□□ -1.95
EAR1YMR171C YER188C-AP0C0V2 99 aa2.88□□□□□ -1.95
EAR1YMR171C LCL1Q02786 101 aa2.88□□□□□ -1.95
EAR1YMR171C YNL277W-AQ3E7Z0 62 aa2.88□□□□□ -1.95
EAR1YMR171C YDR010CQ12426 110 aa2.87□□□□□ -1.95
EAR1YMR171C YCR095W-AQ3E787 52 aa2.87□□□□□ -1.95
EAR1YMR171C YFR032C-BQ8TGU2 87 aa2.86□□□□□ -1.95
EAR1YMR171C MMS2P53152 137 aa2.85□□□□□ -1.95
EAR1YMR171C YHR073W-AP0C5N7 58 aa2.85□□□□□ -1.95
EAR1YMR171C LCL2Q08045 131 aa2.83□□□□□ -1.96
EAR1YMR171C YJR128WP47162 119 aa2.82□□□□□ -1.96
EAR1YMR171C YGL149WP53116 101 aa2.82□□□□□ -1.96
EAR1YMR171C YGR146C-AQ8TGT9 53 aa2.81□□□□□ -1.96
EAR1YMR171C COX8P04039 78 aa2.8□□□□□ -1.96
EAR1YMR171C YBR201C-AQ2V2Q3 67 aa2.8□□□□□ -1.96
EAR1YMR171C YOR316C-AQ3E806 69 aa2.79□□□□□ -1.96
EAR1YMR171C YLR255CO13574 117 aa2.79□□□□□ -1.96
EAR1YMR171C ATP17Q06405 101 aa2.79□□□□□ -1.96
EAR1YMR171C COX7P10174 60 aa2.76□□□□□ -1.97
EAR1YMR171C YNL122CP53921 115 aaPredicted RBP2.76□□□□□ -1.97
EAR1YMR171C OLI1P61829 76 aa2.76□□□□□ -1.97
EAR1YMR171C DDR48P18899 430 aaKnown RBP2.75□□□□□ -1.97
EAR1YMR171C YBL008W-AQ3E821 79 aa2.75□□□□□ -1.97
EAR1YMR171C MRX7P53869 86 aa2.74□□□□□ -1.97
EAR1YMR171C YIL156W-BQ2V2P4 73 aa2.74□□□□□ -1.97
EAR1YMR171C YML100W-AQ8TGT0 57 aa2.71□□□□□ -1.98
EAR1YMR171C YBR016WP38216 128 aa2.7□□□□□ -1.98
EAR1YMR171C YOR376W-AQ3E805 51 aa2.7□□□□□ -1.98
EAR1YMR171C YJL144WP47009 104 aa2.67□□□□□ -1.98
EAR1YMR171C RPL37BP51402 88 aaKnown RBP2.67□□□□□ -1.98
EAR1YMR171C FYV12Q08559 129 aa2.67□□□□□ -1.98
EAR1YMR171C YGL034CP53186 121 aa2.66□□□□□ -1.98
EAR1YMR171C YGL014C-AP0C5N1 53 aa2.61□□□□□ -1.99
EAR1YMR171C YEL014CP39999 101 aa2.61□□□□□ -1.99
EAR1YMR171C QCR10P37299 77 aa2.59□□□□□ -2
EAR1YMR171C YBL044WP38194 122 aa2.56□□□□□ -2
EAR1YMR171C YOR394C-AQ8TGJ0 55 aa2.55□□□□□ -2
EAR1YMR171C YCR108CQ3E819 63 aa2.53□□□□□ -2
EAR1YMR171C CMC4Q3E7A9 73 aa2.51□□□□□ -2.01
EAR1YMR171C SOM1Q05676 74 aa2.5□□□□□ -2.01
EAR1YMR171C Q0017Q9ZZX8 53 aa2.48□□□□□ -2.01
EAR1YMR171C YML054C-AQ3E809 52 aa2.46□□□□□ -2.02
EAR1YMR171C RPL37AP49166 88 aaKnown RBP2.44□□□□□ -2.02
EAR1YMR171C YHR032W-AP0C5N6 59 aa2.43□□□□□ -2.02
EAR1YMR171C YJL009WP47078 108 aa2.42□□□□□ -2.02
EAR1YMR171C YOR072W-BQ3E832 53 aa2.41□□□□□ -2.02
EAR1YMR171C YBR072C-AQ3E794 53 aa2.35□□□□□ -2.03
EAR1YMR171C HHY1P39982 102 aa2.34□□□□□ -2.03
EAR1YMR171C YDR210WQ03482 75 aa2.34□□□□□ -2.03
EAR1YMR171C YHR086W-AQ3E746 53 aa2.29□□□□□ -2.04
EAR1YMR171C YHR050W-AQ05451 56 aa1.94□□□□□ -2.1
EAR1YMR171C RPS29BP41058 56 aaKnown RBP1.9□□□□□ -2.1
EAR1YMR171C YOL164W-AQ3E7A5 60 aa1.89□□□□□ -2.11
EAR1YMR171C RPS29AP41057 56 aaKnown RBP1.78□□□□□ -2.12
EAR1YMR171C YLR157W-EP0CF00 54 aa1.67□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 25.9 ms