RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W EDC1P53080 175 aaPredicted RBP1.8□□□□□ -2.12
CSM3YMR048W YPR153WQ06537 140 aa1.8□□□□□ -2.12
CSM3YMR048W MDN1Q12019 4910 aaKnown RBP1.79□□□□□ -2.12
CSM3YMR048W TOM6P33448 61 aa1.79□□□□□ -2.12
CSM3YMR048W YLR361C-AQ3E795 98 aa1.78□□□□□ -2.12
CSM3YMR048W COX8P04039 78 aa1.77□□□□□ -2.13
CSM3YMR048W YOL013W-AP0C272 63 aaPredicted RBP1.77□□□□□ -2.13
CSM3YMR048W YIL102CP40488 101 aa1.77□□□□□ -2.13
CSM3YMR048W FYV12Q08559 129 aa1.77□□□□□ -2.13
CSM3YMR048W YDR119W-AQ2V2P9 66 aa1.76□□□□□ -2.13
CSM3YMR048W YOR316C-AQ3E806 69 aa1.76□□□□□ -2.13
CSM3YMR048W YLR255CO13574 117 aa1.75□□□□□ -2.13
CSM3YMR048W AIM4P38305 123 aaPredicted RBP1.75□□□□□ -2.13
CSM3YMR048W NOP10Q6Q547 58 aaPredicted RBP1.75□□□□□ -2.13
CSM3YMR048W YGR146C-AQ8TGT9 53 aa1.75□□□□□ -2.13
CSM3YMR048W SDH6Q3E785 79 aa1.74□□□□□ -2.13
CSM3YMR048W HUB1Q6Q546 73 aa1.74□□□□□ -2.13
CSM3YMR048W RPL37BP51402 88 aaKnown RBP1.73□□□□□ -2.13
CSM3YMR048W OLI1P61829 76 aa1.73□□□□□ -2.13
CSM3YMR048W YKL065W-AQ2V2P2 73 aa1.73□□□□□ -2.13
CSM3YMR048W OST5Q92316 86 aa1.73□□□□□ -2.13
CSM3YMR048W YIL156W-BQ2V2P4 73 aa1.72□□□□□ -2.13
CSM3YMR048W YML054C-AQ3E809 52 aa1.72□□□□□ -2.13
CSM3YMR048W YJR128WP47162 119 aa1.71□□□□□ -2.14
CSM3YMR048W MRX7P53869 86 aa1.71□□□□□ -2.14
CSM3YMR048W YOL166W-AQ8TGJ1 51 aa1.71□□□□□ -2.14
CSM3YMR048W YDR246W-AQ3E763 66 aa1.7□□□□□ -2.14
CSM3YMR048W YBR016WP38216 128 aa1.69□□□□□ -2.14
CSM3YMR048W YBR201C-AQ2V2Q3 67 aa1.69□□□□□ -2.14
CSM3YMR048W YMR001C-AQ8TGS9 76 aa1.68□□□□□ -2.14
CSM3YMR048W RPS30AP0CX33 63 aaKnown RBP1.67□□□□□ -2.14
CSM3YMR048W RPS30BP0CX34 63 aaKnown RBP1.67□□□□□ -2.14
CSM3YMR048W YIR021W-AQ3E739 70 aa1.66□□□□□ -2.14
CSM3YMR048W YML100W-AQ8TGT0 57 aa1.66□□□□□ -2.14
CSM3YMR048W YJL009WP47078 108 aa1.64□□□□□ -2.15
CSM3YMR048W YDR210WQ03482 75 aa1.63□□□□□ -2.15
CSM3YMR048W SBH1P52870 82 aa1.59□□□□□ -2.15
CSM3YMR048W YMR122CQ03879 124 aa1.59□□□□□ -2.15
CSM3YMR048W ATP17Q06405 101 aa1.59□□□□□ -2.15
CSM3YMR048W YCR095W-AQ3E787 52 aa1.59□□□□□ -2.15
CSM3YMR048W YOR381W-AQ3E804 55 aa1.58□□□□□ -2.16
CSM3YMR048W YOR394C-AQ8TGJ0 55 aa1.58□□□□□ -2.16
CSM3YMR048W YBL044WP38194 122 aa1.57□□□□□ -2.16
CSM3YMR048W YER188C-AP0C0V2 99 aa1.56□□□□□ -2.16
CSM3YMR048W YLR412C-AQ3E742 68 aa1.53□□□□□ -2.16
CSM3YMR048W RPS29BP41058 56 aaKnown RBP1.52□□□□□ -2.17
CSM3YMR048W YOR072W-BQ3E832 53 aa1.52□□□□□ -2.17
CSM3YMR048W RPL37AP49166 88 aaKnown RBP1.51□□□□□ -2.17
CSM3YMR048W QCR10P37299 77 aa1.49□□□□□ -2.17
CSM3YMR048W YEL014CP39999 101 aa1.49□□□□□ -2.17
CSM3YMR048W RPS29AP41057 56 aaKnown RBP1.47□□□□□ -2.17
CSM3YMR048W YNL277W-AQ3E7Z0 62 aa1.45□□□□□ -2.18
CSM3YMR048W YCR108CQ3E819 63 aa1.45□□□□□ -2.18
CSM3YMR048W YBR072C-AQ3E794 53 aa1.42□□□□□ -2.18
CSM3YMR048W RPS28BP0C0X0 67 aaKnown RBP1.4□□□□□ -2.19
CSM3YMR048W RPS28AQ3E7X9 67 aaPredicted RBP1.4□□□□□ -2.19
CSM3YMR048W YGL014C-AP0C5N1 53 aa1.39□□□□□ -2.19
CSM3YMR048W HHY1P39982 102 aa1.38□□□□□ -2.19
CSM3YMR048W SOM1Q05676 74 aa1.36□□□□□ -2.19
CSM3YMR048W YHR050W-AQ05451 56 aa1.27□□□□□ -2.21
CSM3YMR048W YOR376W-AQ3E805 51 aa1.2□□□□□ -2.22
CSM3YMR048W YLR157W-EP0CF00 54 aa1□□□□□ -2.25
CSM3YMR048W YOL164W-AQ3E7A5 60 aa0.96□□□□□ -2.26
Retrieved 63 of 5,963 RNA–protein pairs in 65.2 ms