RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSI1, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSI1	YMR025W	YER188C-A	P0C0V2	99 aa		0.77	□□□□□ -2.29
CSI1	YMR025W	RPS28B	P0C0X0	67 aa	Known RBP	0.77	□□□□□ -2.29
CSI1	YMR025W	RPL38	P49167	78 aa	Known RBP	0.77	□□□□□ -2.29
CSI1	YMR025W	YPR153W	Q06537	140 aa		0.77	□□□□□ -2.29
CSI1	YMR025W	YIL102C-A	Q2V2P5	75 aa		0.77	□□□□□ -2.29
CSI1	YMR025W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.77	□□□□□ -2.29
CSI1	YMR025W	YML054C-A	Q3E809	52 aa		0.77	□□□□□ -2.29
CSI1	YMR025W	PBI2	P0CT04	75 aa	Known RBP	0.76	□□□□□ -2.29
CSI1	YMR025W	YBR016W	P38216	128 aa		0.76	□□□□□ -2.29
CSI1	YMR025W	YAR064W	P39563	99 aa		0.76	□□□□□ -2.29
CSI1	YMR025W	LSM8	P47093	109 aa	Known RBP	0.76	□□□□□ -2.29
CSI1	YMR025W	YEL014C	P39999	101 aa		0.74	□□□□□ -2.29
CSI1	YMR025W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.73	□□□□□ -2.29
CSI1	YMR025W	RPA12	P32529	125 aa	Known RBP	0.73	□□□□□ -2.29
CSI1	YMR025W	YGR039W	P53225	103 aa		0.73	□□□□□ -2.29
CSI1	YMR025W	YIL156W-B	Q2V2P4	73 aa		0.73	□□□□□ -2.29
CSI1	YMR025W	YGR146C-A	Q8TGT9	53 aa		0.73	□□□□□ -2.29
CSI1	YMR025W	YCR085W	P25650	117 aa		0.72	□□□□□ -2.29
CSI1	YMR025W	YNL198C	P40166	100 aa		0.72	□□□□□ -2.29
CSI1	YMR025W	YIL102C	P40488	101 aa		0.72	□□□□□ -2.29
CSI1	YMR025W	YFL041W-A	Q3E817	63 aa		0.72	□□□□□ -2.29
CSI1	YMR025W	YBL044W	P38194	122 aa		0.71	□□□□□ -2.3
CSI1	YMR025W	YLR285C-A	Q3E771	56 aa		0.71	□□□□□ -2.3
CSI1	YMR025W	AIM4	P38305	123 aa	Predicted RBP	0.7	□□□□□ -2.3
CSI1	YMR025W	OLI1	P61829	76 aa		0.7	□□□□□ -2.3
CSI1	YMR025W	YKL065W-A	Q2V2P2	73 aa		0.7	□□□□□ -2.3
CSI1	YMR025W	RPS30A	P0CX33	63 aa	Known RBP	0.69	□□□□□ -2.3
CSI1	YMR025W	RPS30B	P0CX34	63 aa	Known RBP	0.69	□□□□□ -2.3
CSI1	YMR025W	YSY6	P38374	65 aa		0.69	□□□□□ -2.3
CSI1	YMR025W	MRX7	P53869	86 aa		0.68	□□□□□ -2.3
CSI1	YMR025W	YOR314W	Q12506	109 aa		0.68	□□□□□ -2.3
CSI1	YMR025W	ATX1	P38636	73 aa		0.67	□□□□□ -2.3
CSI1	YMR025W	NOP10	Q6Q547	58 aa	Predicted RBP	0.66	□□□□□ -2.3
CSI1	YMR025W	OST5	Q92316	86 aa		0.66	□□□□□ -2.3
CSI1	YMR025W	YBR201C-A	Q2V2Q3	67 aa		0.65	□□□□□ -2.31
CSI1	YMR025W	YDR182W-A	Q3E796	67 aa		0.64	□□□□□ -2.31
CSI1	YMR025W	YOR394C-A	Q8TGJ0	55 aa		0.64	□□□□□ -2.31
CSI1	YMR025W	YOL166W-A	Q8TGJ1	51 aa		0.64	□□□□□ -2.31
CSI1	YMR025W	HHY1	P39982	102 aa		0.63	□□□□□ -2.31
CSI1	YMR025W	SDH6	Q3E785	79 aa		0.63	□□□□□ -2.31
CSI1	YMR025W	YGL014C-A	P0C5N1	53 aa		0.62	□□□□□ -2.31
CSI1	YMR025W	SOM1	Q05676	74 aa		0.61	□□□□□ -2.31
CSI1	YMR025W	YMR001C-A	Q8TGS9	76 aa		0.61	□□□□□ -2.31
CSI1	YMR025W	ATP17	Q06405	101 aa		0.6	□□□□□ -2.31
CSI1	YMR025W	YDR246W-A	Q3E763	66 aa		0.6	□□□□□ -2.31
CSI1	YMR025W	YPL038W-A	Q3E7B4	63 aa		0.6	□□□□□ -2.31
CSI1	YMR025W	YMR122C	Q03879	124 aa		0.59	□□□□□ -2.31
CSI1	YMR025W	SLO1	Q3E784	85 aa		0.59	□□□□□ -2.31
CSI1	YMR025W	HUB1	Q6Q546	73 aa		0.59	□□□□□ -2.31
CSI1	YMR025W	YDR119W-A	Q2V2P9	66 aa		0.57	□□□□□ -2.32
CSI1	YMR025W	YOR072W-B	Q3E832	53 aa		0.57	□□□□□ -2.32
CSI1	YMR025W	YCR108C	Q3E819	63 aa		0.56	□□□□□ -2.32
CSI1	YMR025W	TOM6	P33448	61 aa		0.55	□□□□□ -2.32
CSI1	YMR025W	QCR10	P37299	77 aa		0.53	□□□□□ -2.32
CSI1	YMR025W	RUB1	Q03919	77 aa		0.5	□□□□□ -2.33
CSI1	YMR025W	YHR050W-A	Q05451	56 aa		0.49	□□□□□ -2.33
CSI1	YMR025W	YCR095W-A	Q3E787	52 aa		0.49	□□□□□ -2.33
CSI1	YMR025W	YLR157W-E	P0CF00	54 aa		0.48	□□□□□ -2.33
CSI1	YMR025W	YBR072C-A	Q3E794	53 aa		0.47	□□□□□ -2.33
CSI1	YMR025W	YNL277W-A	Q3E7Z0	62 aa		0.45	□□□□□ -2.34
CSI1	YMR025W	YOR376W-A	Q3E805	51 aa		0.39	□□□□□ -2.35
CSI1	YMR025W	YIR021W-A	Q3E739	70 aa		0.36	□□□□□ -2.35
CSI1	YMR025W	YOL164W-A	Q3E7A5	60 aa		0.25	□□□□□ -2.37

Retrieved 63 of 5,963 RNA–protein pairs in 28 ms