RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W YPL038W-AQ3E7B4 63 aa2.34□□□□□ -2.04
USA1YML029W LIP1Q03579 150 aa2.33□□□□□ -2.04
USA1YML029W YAL067W-AQ8TGK6 75 aa2.33□□□□□ -2.04
USA1YML029W QCR10P37299 77 aa2.33□□□□□ -2.04
USA1YML029W YNL122CP53921 115 aaPredicted RBP2.32□□□□□ -2.04
USA1YML029W YHR073W-AP0C5N7 58 aa2.32□□□□□ -2.04
USA1YML029W SOM1Q05676 74 aa2.31□□□□□ -2.04
USA1YML029W AIM4P38305 123 aaPredicted RBP2.31□□□□□ -2.04
USA1YML029W YAR064WP39563 99 aa2.29□□□□□ -2.04
USA1YML029W YIL156W-BQ2V2P4 73 aa2.29□□□□□ -2.04
USA1YML029W RPL36AP05745 100 aaPredicted RBP2.28□□□□□ -2.04
USA1YML029W YHR125WP38831 101 aa2.28□□□□□ -2.04
USA1YML029W YDR246W-AQ3E763 66 aa2.27□□□□□ -2.05
USA1YML029W YPR153WQ06537 140 aa2.27□□□□□ -2.05
USA1YML029W YMR122CQ03879 124 aa2.26□□□□□ -2.05
USA1YML029W YDL012CQ12489 107 aa2.26□□□□□ -2.05
USA1YML029W YOR314WQ12506 109 aa2.26□□□□□ -2.05
USA1YML029W OST5Q92316 86 aa2.25□□□□□ -2.05
USA1YML029W YER188C-AP0C0V2 99 aa2.25□□□□□ -2.05
USA1YML029W NOP10Q6Q547 58 aaPredicted RBP2.25□□□□□ -2.05
USA1YML029W RPL37BP51402 88 aaKnown RBP2.24□□□□□ -2.05
USA1YML029W YOL013W-AP0C272 63 aaPredicted RBP2.24□□□□□ -2.05
USA1YML029W Q0017Q9ZZX8 53 aa2.23□□□□□ -2.05
USA1YML029W YHR032W-AP0C5N6 59 aa2.23□□□□□ -2.05
USA1YML029W YIL102CP40488 101 aa2.22□□□□□ -2.05
USA1YML029W YCR095W-AQ3E787 52 aa2.22□□□□□ -2.05
USA1YML029W YOR316C-AQ3E806 69 aa2.2□□□□□ -2.06
USA1YML029W YOL166W-AQ8TGJ1 51 aa2.2□□□□□ -2.06
USA1YML029W YDR182W-AQ3E796 67 aa2.19□□□□□ -2.06
USA1YML029W RPS30AP0CX33 63 aaKnown RBP2.19□□□□□ -2.06
USA1YML029W RPS30BP0CX34 63 aaKnown RBP2.19□□□□□ -2.06
USA1YML029W YJR128WP47162 119 aa2.18□□□□□ -2.06
USA1YML029W YLR255CO13574 117 aa2.15□□□□□ -2.07
USA1YML029W YGR146C-AQ8TGT9 53 aa2.15□□□□□ -2.07
USA1YML029W YJL144WP47009 104 aa2.14□□□□□ -2.07
USA1YML029W COX8P04039 78 aa2.13□□□□□ -2.07
USA1YML029W YKL065W-AQ2V2P2 73 aa2.13□□□□□ -2.07
USA1YML029W MRX7P53869 86 aa2.13□□□□□ -2.07
USA1YML029W YEL014CP39999 101 aa2.12□□□□□ -2.07
USA1YML029W YBR016WP38216 128 aa2.11□□□□□ -2.07
USA1YML029W SDH6Q3E785 79 aa2.11□□□□□ -2.07
USA1YML029W YGL014C-AP0C5N1 53 aa2.09□□□□□ -2.07
USA1YML029W YML054C-AQ3E809 52 aa2.08□□□□□ -2.08
USA1YML029W YJL009WP47078 108 aa2.08□□□□□ -2.08
USA1YML029W OLI1P61829 76 aa2.08□□□□□ -2.08
USA1YML029W YDR210WQ03482 75 aa2.07□□□□□ -2.08
USA1YML029W YMR001C-AQ8TGS9 76 aa2.07□□□□□ -2.08
USA1YML029W YBR201C-AQ2V2Q3 67 aa2.06□□□□□ -2.08
USA1YML029W HUB1Q6Q546 73 aa2.04□□□□□ -2.08
USA1YML029W ATP17Q06405 101 aa1.97□□□□□ -2.09
USA1YML029W YBL044WP38194 122 aa1.96□□□□□ -2.1
USA1YML029W YOR394C-AQ8TGJ0 55 aa1.92□□□□□ -2.1
USA1YML029W RPS29BP41058 56 aaKnown RBP1.89□□□□□ -2.11
USA1YML029W YCR108CQ3E819 63 aa1.84□□□□□ -2.11
USA1YML029W RPS29AP41057 56 aaKnown RBP1.84□□□□□ -2.12
USA1YML029W RPL37AP49166 88 aaKnown RBP1.83□□□□□ -2.12
USA1YML029W YHR086W-AQ3E746 53 aa1.81□□□□□ -2.12
USA1YML029W YOR072W-BQ3E832 53 aa1.78□□□□□ -2.12
USA1YML029W HHY1P39982 102 aa1.67□□□□□ -2.14
USA1YML029W YBR072C-AQ3E794 53 aa1.63□□□□□ -2.15
USA1YML029W YOL164W-AQ3E7A5 60 aa1.58□□□□□ -2.16
USA1YML029W YHR050W-AQ05451 56 aa1.49□□□□□ -2.17
USA1YML029W YLR157W-EP0CF00 54 aa1.43□□□□□ -2.18
Retrieved 63 of 5,963 RNA–protein pairs in 9.6 ms