RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W DYN1P36022 4092 aa1.04□□□□□ -2.24
VPS38YLR360W COX8P04039 78 aa1.04□□□□□ -2.24
VPS38YLR360W YBL039W-BP0C268 59 aa1.04□□□□□ -2.24
VPS38YLR360W YBR230W-AQ3E762 66 aa1.04□□□□□ -2.24
VPS38YLR360W RPL29P05747 59 aaPredicted RBP1.03□□□□□ -2.24
VPS38YLR360W MVB12P42939 101 aa1.03□□□□□ -2.24
VPS38YLR360W YOR072WQ08486 104 aa1.03□□□□□ -2.24
VPS38YLR360W YBR201C-AQ2V2Q3 67 aa1.03□□□□□ -2.24
VPS38YLR360W YAR064WP39563 99 aa1.02□□□□□ -2.25
VPS38YLR360W YMR105W-AQ8TGS8 64 aa1.02□□□□□ -2.25
VPS38YLR360W CSF1Q12150 2958 aa1.01□□□□□ -2.25
VPS38YLR360W TOM1Q03280 3268 aa1.01□□□□□ -2.25
VPS38YLR360W RPL43AP0CX25 92 aaKnown RBP1.01□□□□□ -2.25
VPS38YLR360W RPL43BP0CX26 92 aa1.01□□□□□ -2.25
VPS38YLR360W YIL046W-AQ3E7Z4 54 aa1.01□□□□□ -2.25
VPS38YLR360W YLR307C-AQ3E825 87 aa1.01□□□□□ -2.25
VPS38YLR360W YJL127C-BQ3E828 52 aa1.01□□□□□ -2.25
VPS38YLR360W RPL39P04650 51 aa1□□□□□ -2.25
VPS38YLR360W DDR2P89113 61 aa1□□□□□ -2.25
VPS38YLR360W YGL041C-BQ3E750 60 aa1□□□□□ -2.25
VPS38YLR360W YOL097W-AQ3E7Y9 61 aa1□□□□□ -2.25
VPS38YLR360W YOR011W-AQ3E807 68 aa1□□□□□ -2.25
VPS38YLR360W RPL33AP05744 107 aaKnown RBP0.99□□□□□ -2.25
VPS38YLR360W YJR128WP47162 119 aa0.99□□□□□ -2.25
VPS38YLR360W PMP3P87284 55 aa0.99□□□□□ -2.25
VPS38YLR360W YGR240C-AQ3E786 66 aa0.99□□□□□ -2.25
VPS38YLR360W VPS13Q07878 3144 aa0.99□□□□□ -2.25
VPS38YLR360W YIL086CP40503 102 aa0.98□□□□□ -2.25
VPS38YLR360W YOR394C-AQ8TGJ0 55 aa0.98□□□□□ -2.25
VPS38YLR360W TAR1Q8TGM6 124 aa0.98□□□□□ -2.25
VPS38YLR360W COX7P10174 60 aa0.96□□□□□ -2.26
VPS38YLR360W HOR7Q05827 59 aa0.96□□□□□ -2.26
VPS38YLR360W YCR108CQ3E819 63 aa0.96□□□□□ -2.26
VPS38YLR360W RPC10P40422 70 aa0.95□□□□□ -2.26
VPS38YLR360W LCL1Q02786 101 aa0.95□□□□□ -2.26
VPS38YLR360W YGR146C-AQ8TGT9 53 aa0.95□□□□□ -2.26
VPS38YLR360W FMP27Q06179 2628 aa0.95□□□□□ -2.26
VPS38YLR360W IRA1P18963 3092 aa0.95□□□□□ -2.26
VPS38YLR360W YBL044WP38194 122 aa0.93□□□□□ -2.26
VPS38YLR360W YBR016WP38216 128 aa0.93□□□□□ -2.26
VPS38YLR360W YDR524C-BQ3E6R4 66 aa0.93□□□□□ -2.26
VPS38YLR360W OLI1P61829 76 aa0.92□□□□□ -2.26
VPS38YLR360W YOR316C-AQ3E806 69 aa0.92□□□□□ -2.26
VPS38YLR360W YHR073W-AP0C5N7 58 aa0.9□□□□□ -2.26
VPS38YLR360W YJL009WP47078 108 aa0.89□□□□□ -2.27
VPS38YLR360W TOR2P32600 2474 aaKnown RBP0.89□□□□□ -2.27
VPS38YLR360W YLL066W-BQ8TGJ7 56 aa0.89□□□□□ -2.27
VPS38YLR360W TEL1P38110 2787 aa0.86□□□□□ -2.27
VPS38YLR360W MDN1Q12019 4910 aaKnown RBP0.85□□□□□ -2.27
VPS38YLR360W HHY1P39982 102 aa0.85□□□□□ -2.27
VPS38YLR360W YBR072C-AQ3E794 53 aa0.85□□□□□ -2.27
VPS38YLR360W YDR034C-AP0C289 58 aa0.82□□□□□ -2.28
VPS38YLR360W YOL164W-AQ3E7A5 60 aa0.8□□□□□ -2.28
VPS38YLR360W YOR072W-BQ3E832 53 aa0.8□□□□□ -2.28
VPS38YLR360W Q0297Q9ZZV8 51 aa0.76□□□□□ -2.29
VPS38YLR360W YBR056W-AI2HB52 66 aa0.75□□□□□ -2.29
VPS38YLR360W YDR034W-BQ6Q5X2 51 aa0.72□□□□□ -2.29
VPS38YLR360W YLR157W-EP0CF00 54 aa0.69□□□□□ -2.3
VPS38YLR360W YML054C-AQ3E809 52 aa0.66□□□□□ -2.3
VPS38YLR360W Q0017Q9ZZX8 53 aa0.64□□□□□ -2.31
VPS38YLR360W YHR050W-AQ05451 56 aa0.61□□□□□ -2.31
VPS38YLR360W RPS29AP41057 56 aaKnown RBP0.59□□□□□ -2.32
VPS38YLR360W RPS29BP41058 56 aaKnown RBP0.55□□□□□ -2.32
Retrieved 63 of 5,963 RNA–protein pairs in 88.7 ms