RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W YJL144WP47009 104 aa5.62□□□□□ -1.51
SHH4YLR164W RPL37BP51402 88 aaKnown RBP5.62□□□□□ -1.51
SHH4YLR164W TOM6P33448 61 aa5.58□□□□□ -1.52
SHH4YLR164W YDR182W-AQ3E796 67 aa5.58□□□□□ -1.52
SHH4YLR164W YHR125WP38831 101 aa5.55□□□□□ -1.52
SHH4YLR164W YLR255CO13574 117 aa5.54□□□□□ -1.52
SHH4YLR164W YGR146C-AQ8TGT9 53 aa5.52□□□□□ -1.53
SHH4YLR164W RPS30AP0CX33 63 aaKnown RBP5.49□□□□□ -1.53
SHH4YLR164W RPS30BP0CX34 63 aaKnown RBP5.49□□□□□ -1.53
SHH4YLR164W YKL065W-AQ2V2P2 73 aa5.48□□□□□ -1.53
SHH4YLR164W YBR016WP38216 128 aa5.46□□□□□ -1.54
SHH4YLR164W COX8P04039 78 aa5.45□□□□□ -1.54
SHH4YLR164W YBL008W-AQ3E821 79 aa5.42□□□□□ -1.54
SHH4YLR164W YFR032C-BQ8TGU2 87 aa5.41□□□□□ -1.54
SHH4YLR164W SDH6Q3E785 79 aa5.38□□□□□ -1.55
SHH4YLR164W FYV12Q08559 129 aa5.32□□□□□ -1.56
SHH4YLR164W OLI1P61829 76 aa5.31□□□□□ -1.56
SHH4YLR164W YIL156W-BQ2V2P4 73 aa5.3□□□□□ -1.56
SHH4YLR164W YMR001C-AQ8TGS9 76 aa5.29□□□□□ -1.56
SHH4YLR164W Q0017Q9ZZX8 53 aa5.29□□□□□ -1.56
SHH4YLR164W YJL009WP47078 108 aa5.28□□□□□ -1.56
SHH4YLR164W OST5Q92316 86 aa5.27□□□□□ -1.57
SHH4YLR164W YBR201C-AQ2V2Q3 67 aa5.25□□□□□ -1.57
SHH4YLR164W MRX7P53869 86 aa5.19□□□□□ -1.58
SHH4YLR164W HUB1Q6Q546 73 aa5.18□□□□□ -1.58
SHH4YLR164W YIR021W-AQ3E739 70 aa5.15□□□□□ -1.59
SHH4YLR164W YGL034CP53186 121 aa5.12□□□□□ -1.59
SHH4YLR164W YDR210WQ03482 75 aa5.12□□□□□ -1.59
SHH4YLR164W YMR122CQ03879 124 aa5.11□□□□□ -1.59
SHH4YLR164W YOR381W-AQ3E804 55 aa5.1□□□□□ -1.59
SHH4YLR164W YBL044WP38194 122 aa5.09□□□□□ -1.59
SHH4YLR164W YER188C-AP0C0V2 99 aa4.97□□□□□ -1.61
SHH4YLR164W YML054C-AQ3E809 52 aa4.94□□□□□ -1.62
SHH4YLR164W YCR095W-AQ3E787 52 aa4.93□□□□□ -1.62
SHH4YLR164W YOR394C-AQ8TGJ0 55 aa4.91□□□□□ -1.62
SHH4YLR164W SBH1P52870 82 aa4.87□□□□□ -1.63
SHH4YLR164W ATP17Q06405 101 aa4.86□□□□□ -1.63
SHH4YLR164W YCR108CQ3E819 63 aa4.78□□□□□ -1.64
SHH4YLR164W RPL37AP49166 88 aaKnown RBP4.69□□□□□ -1.66
SHH4YLR164W YEL014CP39999 101 aa4.68□□□□□ -1.66
SHH4YLR164W YLR412C-AQ3E742 68 aa4.58□□□□□ -1.68
SHH4YLR164W QCR10P37299 77 aa4.48□□□□□ -1.69
SHH4YLR164W YOR072W-BQ3E832 53 aa4.41□□□□□ -1.7
SHH4YLR164W YGL014C-AP0C5N1 53 aa4.36□□□□□ -1.71
SHH4YLR164W RPS29BP41058 56 aaKnown RBP4.33□□□□□ -1.72
SHH4YLR164W YBR121C-AP0C5L4 52 aa4.28□□□□□ -1.72
SHH4YLR164W YNL277W-AQ3E7Z0 62 aa4.26□□□□□ -1.73
SHH4YLR164W RPS28BP0C0X0 67 aaKnown RBP4.24□□□□□ -1.73
SHH4YLR164W RPS28AQ3E7X9 67 aaPredicted RBP4.24□□□□□ -1.73
SHH4YLR164W HHY1P39982 102 aa4.21□□□□□ -1.74
SHH4YLR164W SOM1Q05676 74 aa4.21□□□□□ -1.74
SHH4YLR164W RPS29AP41057 56 aaKnown RBP4.19□□□□□ -1.74
SHH4YLR164W YOR376W-AQ3E805 51 aa4.15□□□□□ -1.75
SHH4YLR164W YML100W-AQ8TGT0 57 aa4.13□□□□□ -1.75
SHH4YLR164W YBR072C-AQ3E794 53 aa4.01□□□□□ -1.77
SHH4YLR164W YER175W-AQ8TGU4 54 aa3.75□□□□□ -1.81
SHH4YLR164W YHR050W-AQ05451 56 aa3.6□□□□□ -1.83
SHH4YLR164W YAL067W-AQ8TGK6 75 aa3.23□□□□□ -1.89
SHH4YLR164W YOL164W-AQ3E7A5 60 aa3.09□□□□□ -1.91
SHH4YLR164W YER078W-AQ3E7A2 54 aa2.99□□□□□ -1.93
SHH4YLR164W YLR157W-EP0CF00 54 aa2.86□□□□□ -1.95
SHH4YLR164W YHR032W-AP0C5N6 59 aa2.29□□□□□ -2.04
SHH4YLR164W YHR086W-AQ3E746 53 aa1.55□□□□□ -2.16
Retrieved 63 of 5,963 RNA–protein pairs in 8.3 ms